Gene Psyr_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0259 
Symbol 
ID3365735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp275025 
End bp276347 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content62% 
IMG OID637650602 
Productsensor histidine kinase 
Protein accessionYP_233370 
Protein GI66043529 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAG TTATGAAGAC TCCGCTCTGG TTCCCGCAAA GCTTTTTCTC CCGCACGCTC 
TGGCTGGTGC TCATCGTCGT GCTGTTTTCC AAGGCCCTGA CGCTGGTTTA TCTGCTGATG
AACGAAGACG TGCTGGTCGA CAGGCAATAC AGCCACGGTG TTGCTCTGAC CTTGCGCGCG
TACTGGGCCG CCGGTGAAAA CGATCGCGAG GCGATTGCCG AGGCGGCGGG CCTGATTCGG
GTAGTGGGCG GTGGCGTGCC GGAAGGCGAG CAGCACTGGC CCTACAGTGA GATCTATCAG
CGACAGATGC AGGCCGAGCT GGGTGCCGAT ACGGAAGTGC GTCTGCGCGT ACACGCGCCG
CCCGCGCTGT GGGTGCGAGC GCCGAGCCTG GGTGACGGCT GGCTGAAAGT GCCGCTGTAT
CCGCACCCGT TGCGCGGTCA GAAAATCTGG AACGTGCTGG GCTGGTTCCT GGCCATCGGA
TTGCTCTCCA CGGCATCAGC CTGGATTTTC GTACGCCAGT TGAATCAGCC GCTCAAGCGT
TTGGTGTTTG CGGCGCGCCA GTTGGGGCAG GGGCGCAGCG TACGGCTGCC GGTGAGTGAC
ACGCCGAGCG AGATGACCGA AGTCTACCGG GCCTTCAATC AGATGGCCGA AGACGTCGAG
CAGGCCGGGC AGGAACGCGA GTTGATGCTG GCCGGTGTTT CCCACGACTT GCGCACGCCG
CTGACGCGCC TGCGCCTGTC TCTGGAGCTG ATGAACGACA ATGAGTTCTC CGAAGGCATG
GTGCGCGATA TCGAGGACAT GGACGCCATT CTCGATCAGT TCCTGGCCTT CATCCGCGAT
GGGCGCGACG AAGAGATCGA AGAGGTCGAT CTGGGGCATC TGGTACGCGA TGTGGTTGCA
CCTTTCAATG ACGATGAAGA CAGCATCCGT CTGTGCCTGG AGCCCATTCC GCCCTTCCCG
TTACGCCGCG TGTCGATGAA GCGCCTGCTG ACCAACCTGA TTGGCAATGC CAAGCACCAT
GCCGGTAACG GTATCGAAGT CGCCGCCTAC GTATCCGGCG ACCGAAACGC GCCCTACGTG
GTGTTGAGCG TGCTGGACCG GGGGGCGGGC ATCGATCCGT CCGAGCTGGA CACCATCTTC
AACCCGTTCA TTCGCGGTGA TCGCGCACGC AGTGGCAAGG GCACCGGCCT CGGCCTGGCC
ATCGTCAAGC GTATCGCTGC CATGCACGGC GGCAACGTCG AGTTGAGAAA TCGTTCGGGA
GGCGGACTGG AAGCACGCGT AAGGCTGCCG CTGGGGCTGA TGCTGCCGAG AGATGCAATT
TAA
 
Protein sequence
MAAVMKTPLW FPQSFFSRTL WLVLIVVLFS KALTLVYLLM NEDVLVDRQY SHGVALTLRA 
YWAAGENDRE AIAEAAGLIR VVGGGVPEGE QHWPYSEIYQ RQMQAELGAD TEVRLRVHAP
PALWVRAPSL GDGWLKVPLY PHPLRGQKIW NVLGWFLAIG LLSTASAWIF VRQLNQPLKR
LVFAARQLGQ GRSVRLPVSD TPSEMTEVYR AFNQMAEDVE QAGQERELML AGVSHDLRTP
LTRLRLSLEL MNDNEFSEGM VRDIEDMDAI LDQFLAFIRD GRDEEIEEVD LGHLVRDVVA
PFNDDEDSIR LCLEPIPPFP LRRVSMKRLL TNLIGNAKHH AGNGIEVAAY VSGDRNAPYV
VLSVLDRGAG IDPSELDTIF NPFIRGDRAR SGKGTGLGLA IVKRIAAMHG GNVELRNRSG
GGLEARVRLP LGLMLPRDAI