| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0255 |
|---|
| Symbol | |
|---|
| ID | 3365731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 269298 |
|---|
| End bp | 270905 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637650598 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_233366 |
|---|
| Protein GI | 66043525 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGATT ACACCTTGAG CGAATTTTTG AACCGCCGTC TTGCCTTGCT CGGCGAGCGC
AACAACCTCT CTTTGCTGGA GCAATGCCTG CACGGTATAG AGCGTGAGTG TCTGCGCGTT
ACTGCAACGG CAGAACTGGC CTGCACGCCT CATCCGCAAG CTCTGGGTGC CGCACTGACC
AATGGCCAGG TCACGACCGA TTATTCCGAA TCGCTGCTGG AGTTCATCAC ACCAGCCTTG
AAGAACCCGG CCGAGACCAT CGACAACCTG GACCGTATCC ATCGCTTCGT TTACAGCAAG
CTGGGCGACG AGCTGCTGTG GAGCCCGTCG ATGCCCTGCC CGTTGCCCGA CGAAGAGCAC
ATCCCGATCG CGTATTACGG CACGTCGAAC ATCGGCAAGC TCAAGTATGT CTATCGCAAG
GGTCTGGCGC TGCGTTATGG CAAGACCATG CAGTGCATTG CCGGCATTCA CTACAACTTC
TCGTTGCCGG AAGACGCCTG GGCGCTGCTC AAGCAGACCG AAGACTTTGC AGGCGATGCG
CGCGACTACC AGTCGCATTC CTACATCGCG CTGATTCGTA ACTTCCGCCG CTACAGCTGG
CTGTTGATGT ACCTGTTCGG TGCTTCACCG GCACTCGACG CGGGGTTCCT GCGCGGCCGC
AAGCATCAGC TGGAGCAACA CTTCGACGCC GACACCCTGT ATCTGCCGTA CGCCACCAGT
CTGCGCATGA GCGACCTGGG TTATCAGAGT GACGCCCAGG CCGACCTGAC CCCTTGCTAC
AACGATCTGG TCAGCTACAC CGACAGCCTG CGCAAGGCCG TGGCCACGCC GTACAAGCCT
TACGTCGAGG TCGGCACTCA TGACCAGAAC GGCGAGTGGG TGCAGCTCAA CACCAACGTG
CTGCAGATCG AGAACGAGTA CTACTCCAAC ATTCGCCCCA AGCGCGTGAC CTATAGCGGC
GAACGCCCCA TTCAGGCGCT GGTGGCCCGT GGTGTGCAGT ACGTCGAAGT GCGCTGCCTG
GACATCAACC CGTTCCTGCC GACCGGCATC AGCCTGGAGC AGTCGCGCTT CATCGATGCG
TTCGTGCTGT ATTGCGCCCT CGAGGAAAGC CAGCAACTGG CCCGCCACGA GTGCTCCAAC
GCAAGCTCGA ACTTCCTGTC AGTGGTCAAG GAAGGGCGTC GCCCGGGTCT GAGCCTGATG
CGTGACAACC GCCCTGTCGA TCTCAAGACC TGGGCAACCG AGCTGATGGA GAAGATCACA
CCGATTGCCC GCTTGCTCGA TCAGGCGCAG GGCATCGACG AGCACCTCAA GTCGATTGCC
GTGCAACAGG CCAAGATCGA CGATACCGCG CTCACACCAT CTGCTCAGGT GCTGGCCAGC
ATGGAAGCGC ATAACGAGGG CTTTACCGCG TTCTCCCTGC GCCAGAGCCA GGTCCACGCC
GAATACTTCC GCACTCACCC GCTGAGCGCT CAGGAACAGG CAGACTTTGA AGCCCAGGCC
AAAACCTCGA TTGAGGAACA GGCCGAGCTG GAAGCGACCG AGGAAGTGGT GGATTTCGAC
ACGTTCGTGG GTTCGTATCA GGCGAGCATT CTGTCGATCA GTAACTGA
|
|---|
| Protein sequence | MKDYTLSEFL NRRLALLGER NNLSLLEQCL HGIERECLRV TATAELACTP HPQALGAALT
NGQVTTDYSE SLLEFITPAL KNPAETIDNL DRIHRFVYSK LGDELLWSPS MPCPLPDEEH
IPIAYYGTSN IGKLKYVYRK GLALRYGKTM QCIAGIHYNF SLPEDAWALL KQTEDFAGDA
RDYQSHSYIA LIRNFRRYSW LLMYLFGASP ALDAGFLRGR KHQLEQHFDA DTLYLPYATS
LRMSDLGYQS DAQADLTPCY NDLVSYTDSL RKAVATPYKP YVEVGTHDQN GEWVQLNTNV
LQIENEYYSN IRPKRVTYSG ERPIQALVAR GVQYVEVRCL DINPFLPTGI SLEQSRFIDA
FVLYCALEES QQLARHECSN ASSNFLSVVK EGRRPGLSLM RDNRPVDLKT WATELMEKIT
PIARLLDQAQ GIDEHLKSIA VQQAKIDDTA LTPSAQVLAS MEAHNEGFTA FSLRQSQVHA
EYFRTHPLSA QEQADFEAQA KTSIEEQAEL EATEEVVDFD TFVGSYQASI LSISN
|
|---|
| |