Gene Psyr_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0227 
Symbol 
ID3365703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp240295 
End bp241794 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content62% 
IMG OID637650570 
Productaldehyde dehydrogenase 
Protein accessionYP_233338 
Protein GI66043497 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGA CCACCCTGAC TCGTGCTGAC TGGGAGCAAC GCGCCCGGAA TTTGAAGATC 
GAAGGCCGTG CCTTCATTCA AGGTGAATAC ACCGCAGCCT CCTCCGGCGA GACGTTTGAC
TGCATCAGTC CGGTCGATGG CCGGATGCTT GCCAAGGTTG CCAGTTGCGA TGCCGCTGAC
GCGCAACGCG CCGTCGACAG CGCGCGCAGC GCCTTCAACT CCGGCGTCTG GTCACGACTG
GCCCCGGCGA AACGCAAGGC CACCATGATC CGTTTCGCGG GGTTGCTTGA GCAGAATGCT
GAAGAACTGG CCCTGCTTGA AACGCTGGAC ATGGGCAAGC CGATCAGCGA CTCGCTGGGT
GTCGACATAC CCGGCGGCGC CCGGGCCCTG AGCTGGAGCG GCGAGGCCAT CGACAAGCTG
TATGACGAAG TCGCGGCAAC GCCGCATGAC CAACTGGGCC TGGTAACGCG CGAGCCGGTG
GGTGTCGTGG CCGCCATCGT GCCGTGGAAT TTTCCGCTGA TGATGGCCTG CTGGAAGCTG
GGCCCTGCGC TGTCCACTGG CAACTCGGTC ATCCTCAAGC CCTCGGAAAA ATCTCCGCTG
ACGGCCATTC GTATCGCACA ACTGGCCATC GAGGCTGGCA TTCCAGCGGG CGTGCTCAAC
GTACTGCCTG GCTATGGCCA CACCGTCGGC AAGGCGCTTG CCCTGCATAT GGATGTGGAC
ACCGTGGTGT TCACCGGCTC GACCAAGATC GCCAAGCAAC TGATGATCTA TGCGGGCGAA
TCGAACATGA AGCGCGTCTG GCTGGAAGCC GGCGGCAAGA GCCCGAATAT CGTCTTTGCC
GACGCGCCTG ATCTGCAGGC CGCCGCCAGC GCAGCCGCCA GCGCGATTGC CTTCAATCAG
GGCGAAGTCT GCACCGCCGG TTCACGCCTG TTGGTCGAGC GCTCCATCAA GGATCGCTTC
CTGCCGATGG TGATCGAGGC GCTCAGTGCC TGGAAGCCCG GCAACCCGCT TGACCCTGCG
ACCACTGTGG GCGCGCTGGT CGATACCCAG CAGATGAATA CCGTGTTGTC TTATATCGAA
GCGGGCCATA GCGATGGCGC CAAACTGGTT GCGGGCGGCA AGCGCATTCT GCAGGAGACC
GGCGGCACCT ATGTCGAGCC GACCATTTTC GACGGCGTGA ACAACGCGAT GAAAATCGCT
CAGGAAGAAA TCTTCGGCCC GGTGCTTTCG GTGCTGACGT TCGATACTGC CGAAGAGGCG
ATCCAGATCG CCAACGACAC GCAGTATGGC CTGGCGGCTG CCGTATGGAC CGCGAACATC
TCCAAGGCGC ACCTGACCGC CAAGGCTTTG CGCGCAGGCA GCGTATGGGT CAACCAGTAC
GACGGCGGCG ACATGACCGC ACCGTTCGGC GGCTTCAAAC AGTCGGGCAA CGGTCGTGAC
AAGTCGCTGC ATGCGTTCGA CAAATACACC GAGCTGAAGT CGACCTGGAT CAAGCTGTAG
 
Protein sequence
MQMTTLTRAD WEQRARNLKI EGRAFIQGEY TAASSGETFD CISPVDGRML AKVASCDAAD 
AQRAVDSARS AFNSGVWSRL APAKRKATMI RFAGLLEQNA EELALLETLD MGKPISDSLG
VDIPGGARAL SWSGEAIDKL YDEVAATPHD QLGLVTREPV GVVAAIVPWN FPLMMACWKL
GPALSTGNSV ILKPSEKSPL TAIRIAQLAI EAGIPAGVLN VLPGYGHTVG KALALHMDVD
TVVFTGSTKI AKQLMIYAGE SNMKRVWLEA GGKSPNIVFA DAPDLQAAAS AAASAIAFNQ
GEVCTAGSRL LVERSIKDRF LPMVIEALSA WKPGNPLDPA TTVGALVDTQ QMNTVLSYIE
AGHSDGAKLV AGGKRILQET GGTYVEPTIF DGVNNAMKIA QEEIFGPVLS VLTFDTAEEA
IQIANDTQYG LAAAVWTANI SKAHLTAKAL RAGSVWVNQY DGGDMTAPFG GFKQSGNGRD
KSLHAFDKYT ELKSTWIKL