Gene Psyr_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0222 
SymbolradC 
ID3365698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp236452 
End bp237126 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content60% 
IMG OID637650565 
ProductDNA repair protein RadC 
Protein accessionYP_233333 
Protein GI66043492 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC GCAGTTGGCC CGCGGCTGAA CGCCCCCGGG AACGCTTGTT GGAGTTGGGG 
GCGGCGAGCC TTTCCGACGC CGAGTTGCTG GCTATCTTTT TACGCACCGG CGTGGCCGGA
AAAAGCGCTG TAGACCTTGC GCGTCATCTG CTGAATCAAT TTGACGGGCT CAGACCGTTA
CTGGATGCGG ATCTGTCGGC ATTCACCTCG CAACTGGGGC TCGGGCCTGC CAAGTTCGCT
CAGTTGCAGG CCGTGATGGA AATGGCGCGT CGGCACATGG CCGAGTCCCT GCGCCGTGAA
TCAGCGCTGG AAAACCCGAC CCAGGTTCGC AGCTATCTCA AGGCCCTGCT GCGGCATGAG
CCGCACGAAG TCTTCGGCTG CCTGTTTCTC GATAACAAGC ACCGGGTCAT GACCTTCGAG
ATATTGTTTC GCGGGACGAT CAACGCGTCT TATGTACACC CGCGCCAGGT GGTGAAACGC
GCGATGGCGC ACAACGCTGC CAGCCTGATT CTCTGCCACA ACCATCCTTC CGGTATCACC
ACGCCCAGCC GTTCCGACAT CGACCTGACC AAGCGCCTCA AGGAAGCACT GCTGCTGGTG
GACGTTCATG TGCTTGACCA CGTGATCGTG GGGGACGGCG AGCCACTGTC GATGGTGGAG
CGCGGGTTGA TGTAG
 
Protein sequence
MSIRSWPAAE RPRERLLELG AASLSDAELL AIFLRTGVAG KSAVDLARHL LNQFDGLRPL 
LDADLSAFTS QLGLGPAKFA QLQAVMEMAR RHMAESLRRE SALENPTQVR SYLKALLRHE
PHEVFGCLFL DNKHRVMTFE ILFRGTINAS YVHPRQVVKR AMAHNAASLI LCHNHPSGIT
TPSRSDIDLT KRLKEALLLV DVHVLDHVIV GDGEPLSMVE RGLM