Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0222 |
Symbol | radC |
ID | 3365698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 236452 |
End bp | 237126 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637650565 |
Product | DNA repair protein RadC |
Protein accession | YP_233333 |
Protein GI | 66043492 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATTC GCAGTTGGCC CGCGGCTGAA CGCCCCCGGG AACGCTTGTT GGAGTTGGGG GCGGCGAGCC TTTCCGACGC CGAGTTGCTG GCTATCTTTT TACGCACCGG CGTGGCCGGA AAAAGCGCTG TAGACCTTGC GCGTCATCTG CTGAATCAAT TTGACGGGCT CAGACCGTTA CTGGATGCGG ATCTGTCGGC ATTCACCTCG CAACTGGGGC TCGGGCCTGC CAAGTTCGCT CAGTTGCAGG CCGTGATGGA AATGGCGCGT CGGCACATGG CCGAGTCCCT GCGCCGTGAA TCAGCGCTGG AAAACCCGAC CCAGGTTCGC AGCTATCTCA AGGCCCTGCT GCGGCATGAG CCGCACGAAG TCTTCGGCTG CCTGTTTCTC GATAACAAGC ACCGGGTCAT GACCTTCGAG ATATTGTTTC GCGGGACGAT CAACGCGTCT TATGTACACC CGCGCCAGGT GGTGAAACGC GCGATGGCGC ACAACGCTGC CAGCCTGATT CTCTGCCACA ACCATCCTTC CGGTATCACC ACGCCCAGCC GTTCCGACAT CGACCTGACC AAGCGCCTCA AGGAAGCACT GCTGCTGGTG GACGTTCATG TGCTTGACCA CGTGATCGTG GGGGACGGCG AGCCACTGTC GATGGTGGAG CGCGGGTTGA TGTAG
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Protein sequence | MSIRSWPAAE RPRERLLELG AASLSDAELL AIFLRTGVAG KSAVDLARHL LNQFDGLRPL LDADLSAFTS QLGLGPAKFA QLQAVMEMAR RHMAESLRRE SALENPTQVR SYLKALLRHE PHEVFGCLFL DNKHRVMTFE ILFRGTINAS YVHPRQVVKR AMAHNAASLI LCHNHPSGIT TPSRSDIDLT KRLKEALLLV DVHVLDHVIV GDGEPLSMVE RGLM
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