Gene Psyr_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0219 
Symbol 
ID3365695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp232009 
End bp233406 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content60% 
IMG OID637650562 
Productphosphomannomutase 
Protein accessionYP_233330 
Protein GI66043489 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC CAGCATCCGT GGCACCCAAC CTTCCCGAGA CTATTTTCCG AGCCTACGAC 
ATCCGTGGCG TGGTCGGGGA CACCCTCAAC GCTGAAACGG CTTACTGGAT CGGCCGCGCC
ATCGGCTCCG AAAGCCTGGC GCAGAACGAA CCCAACGTCA GCGTTGGCCG CGACGGTCGC
CTTTCCGGTC CTGAACTGGT ACAGCAACTG ATTCAAGGTC TGCACGACAG CGGCTGCCAC
GTCAGCGATG TAGGCCTGGT GCCAACGCCT GCGCTGTATT ACGCAGCCAA CGTGCTGGCC
GGCAAGACCG GCGTCATGCT GACCGGCAGC CATAACCCGA AGGACTACAA CGGCTTCAAG
ATCGTCATCG CCGGCGACAC CCTCGCCAAC GAGCAGATCC AGGCGCTGCA CGAGCGCATC
AAGACCAACA ACCTGACGTC GCAGAAAGGC AGCATCACCC AGGTCGACAT CCTTGAGCGC
TACTTCCAGC AGATCAAGAA TGACATCGTC ATGGCGCGCA AGCTGAAGGT CGTGGTCGAC
TGCGGTAACG GCGCGGCAGG CGTGATCGCT CCGCAACTGA TCGAAGCGCT GGGCTGTGAA
GTGATTTCCC TGTTCGCGGA AGTGGATGGC AACTTCCCCA ACCATCACCC GGATCCGGGC
AAGCTGGAAA ACCTGCAGGA CTTGATCGCC AAGGTCAAGG AAACCGGTGC CGACCTGGGC
CTGGCTTTCG ACGGTGACGG CGACCGTGTC GGTGTCGTGA CCAACGCAGG CAACGTGGTG
TACCCGGACC GCCTGTTGAT GCTGTTCGCG CTGGACGTGC TCAAGCGCAA TCCGGGTGCC
GACATCATTT TCGACGTCAA ATGCACACGC CGCCTGACTC CGCTGATCAG CGAGCATGGC
GGCCGTCCGG TGATGTGGAA AACCGGTCAC TCGCTGATCA AGAAAGAAAT GAAGAAAAGC
GGTGCGCTGC TGGCAGGCGA AATGAGCGGC CACATCTTCT TCAAGGAACG CTGGTTCGGT
TTCGACGACG GTATCTACAG CGCAGCACGC CTGCTGGAGA TCCTCAGCCA GGAGTCGGCC
AACGCCGAAG ACCTGTTCGA GACCTTCCCG AACGATATTT CGACGCCTGA AATCAACATC
AAGGTGACGG ATGTCACCAA GTTCAGCATC ATCAAGGCCC TTGAAACGGA TGCGCAGTGG
GGCGACGCCA AACTGACCAC CATCGACGGT GTCCGTGTGG ACTATCCGAA GGGCTGGGGT
CTGGTTCGCG CTTCCAATAC CACGCCGGTA CTGGTGCTGC GTTTCGAAGC CGAGACCGAG
GCCGAATTGC AGCGTATCAA GGACGTGTTC CACGCAGAAC TGAAGAAAGT TGCGCCGGAC
CTCGACCTGC CATTTTGA
 
Protein sequence
MNSPASVAPN LPETIFRAYD IRGVVGDTLN AETAYWIGRA IGSESLAQNE PNVSVGRDGR 
LSGPELVQQL IQGLHDSGCH VSDVGLVPTP ALYYAANVLA GKTGVMLTGS HNPKDYNGFK
IVIAGDTLAN EQIQALHERI KTNNLTSQKG SITQVDILER YFQQIKNDIV MARKLKVVVD
CGNGAAGVIA PQLIEALGCE VISLFAEVDG NFPNHHPDPG KLENLQDLIA KVKETGADLG
LAFDGDGDRV GVVTNAGNVV YPDRLLMLFA LDVLKRNPGA DIIFDVKCTR RLTPLISEHG
GRPVMWKTGH SLIKKEMKKS GALLAGEMSG HIFFKERWFG FDDGIYSAAR LLEILSQESA
NAEDLFETFP NDISTPEINI KVTDVTKFSI IKALETDAQW GDAKLTTIDG VRVDYPKGWG
LVRASNTTPV LVLRFEAETE AELQRIKDVF HAELKKVAPD LDLPF