Gene Psyr_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0215 
Symbol 
ID3365691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp228597 
End bp229376 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID637650558 
Productexodeoxyribonuclease III xth 
Protein accessionYP_233326 
Protein GI66043485 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCA TCAGTGTGAA CGTAAATGGC ATTCAGGCTG CGGTCGAGCG TGGTTTGCTC 
AGCTGGCTGC AAGCTCAGAA TGCCGACGTC ATCTGCTTAC AGGACACCCG CGCCTCCACC
TTTGAACTGG ACGATCCAGC CTTTCAGCTG GATGGTTACT TCCTCTATGC CTGCGAAGCC
GAGGTTCCCG CTCAGGGTGG TGTGGCGCTG TATTCGCGGT TGCAGCCGAA GGCGGTAATC
AGCGGCCTCG GCTTCGAGAC AGCCGACCGC TACGGGCGCT ACCTGCAAGC AGATTTCGAC
AAGGTCAGTA TCGCTACCCT GCTCTTTCCG TCGGGGATGA ATGGCGATGA AGACCTGAAT
CAGAAATTCA AGCTCATGGA CGATTTCGGC AAGTACATGG ACAAGCAGCG CCGCAAGCGT
CGCGAATACA TCTACTGCGG ATCGCTCTAT GTGGCGCAGC AGAAGCTCGA TATCAAGAAC
TGGCGCGACA GCCAGCAGTC GCCCGGCTTC CTCGCGCCCG AACGCGCCTG GATGGACGAA
ATCGTCGGCA CCATGGGCTA CGTCGATGCC CTGCGTGAAG TCAGCCGTGA AGGTGATCAG
TACAGCTGGT GGCCGGATAA CGAACAGGCC GAGATGCTGA ACCTGGGTTG GCGCTTCGAT
TATCAGATCC TGACCCCTGG CCTGCGCCGC TTCGTGCGCA GCGCCCGTCT GCCACGCCAG
CCGCGCTTCT CGCAGCACGC GCCGTTGATC GTGGATTACG ACTGGACCCT GACTATCTGA
 
Protein sequence
MRIISVNVNG IQAAVERGLL SWLQAQNADV ICLQDTRAST FELDDPAFQL DGYFLYACEA 
EVPAQGGVAL YSRLQPKAVI SGLGFETADR YGRYLQADFD KVSIATLLFP SGMNGDEDLN
QKFKLMDDFG KYMDKQRRKR REYIYCGSLY VAQQKLDIKN WRDSQQSPGF LAPERAWMDE
IVGTMGYVDA LREVSREGDQ YSWWPDNEQA EMLNLGWRFD YQILTPGLRR FVRSARLPRQ
PRFSQHAPLI VDYDWTLTI