Gene Psyr_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0212 
Symbol 
ID3365688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp226239 
End bp227102 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID637650555 
Producthypothetical protein 
Protein accessionYP_233323 
Protein GI66043482 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCACA GCATGACTGC CTTTGCCCGA GTAGAGCGGG CCGGTGCCCA GGGCACACTG 
AGCTGGGAAC TGCGCTCGGT CAACCACCGC TATCTTGAGC CACACCTGCG CCTGCCGGAG
TCGTTCCGCG ATCTGGAAGG CGCGATTCGC GAAGCACTGC GTCAGGGCCT GTCGCGCGGC
AAGGTCGAAT GCACACTGCG CTTTGTCGAG GAAACCGCCG GCAAGCCGCT GCAGGTGGAC
CTTGAACGCG CAGGCCAATT GGTCGCCGCA GCCGAGTCGG TTGCCGGCTT GATCAAACAG
CCTGCTGCAT TGAATCCGCT CGAGGTGCTC GCCTGGCCGG GCGTGCTGGT CGCCGATGCC
AACGATCCGC AGGTGTTGAA CACCGAGGCC CTGAAACTGT TCAATGATGC GCTGACCGAA
TTGAAAAGCG GGCGCGGGCG CGAAGGCGCA GACCTGGCGC GGCTGCTCGA CGAGCGTCTG
TCCTCCATCG TCGAAGAAGT CGCCACCTTG CGCACGCTGG TGCCACAGAT GCTCGCAACC
CAGCGGCAGA AGGTGCTGGA TCGCTTTGCC GACATGAAAG CCGAGCTCGA CCCTCAGCGT
CTGGAGCAGG AAATGGTCCT GCTGGCACAG AAAAGCGATG TCGCCGAAGA ACTGGACCGC
CTCAGCACCC ACGTCACTGA AGTGCGCCGC GTACTCAAGG CTGGCGGCCA GGCAGGACGC
CGTCTTGATT TCCTGATGCA AGAGCTTAAC CGCGAAGCGA ATACACTGGG CTCCAAGGCC
TTTGACCCAC GCAGCACGCA GGCTGCCGTC AACCTCAAAG TGTTGATCGA GCAGATGCGT
GAGCAAGTGC AGAATATTGA GTAA
 
Protein sequence
MVHSMTAFAR VERAGAQGTL SWELRSVNHR YLEPHLRLPE SFRDLEGAIR EALRQGLSRG 
KVECTLRFVE ETAGKPLQVD LERAGQLVAA AESVAGLIKQ PAALNPLEVL AWPGVLVADA
NDPQVLNTEA LKLFNDALTE LKSGRGREGA DLARLLDERL SSIVEEVATL RTLVPQMLAT
QRQKVLDRFA DMKAELDPQR LEQEMVLLAQ KSDVAEELDR LSTHVTEVRR VLKAGGQAGR
RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE