Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0209 |
Symbol | |
ID | 3365685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 223004 |
End bp | 225127 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637650552 |
Product | RelA/SpoT protein |
Protein accession | YP_233320 |
Protein GI | 66043479 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAAGGG GTAGCGCCTT GCCGAGCATA GACGCCCTCG CCGACAGACT GTCGGCCTAC CTCGGCAAGG ACCAGGTCAA TCTGGTCCGC CGAGCGTATT TCTACGCCGA ACAAGCCCAC GATGGCCAAC GCCGTCGCAG CGGTGAAGCC TACGTCACCC ATCCTCTCGC GGTGGCGAAC ATTCTTGCCG ATATGCACAT GGACCATCAG AGCCTGATGG CTGCGATGCT GCATGACGTC ATCGAAGACA CCGGGATTGC CAAGGAAGCG CTCAGCGCCC AATTTGGCGA GACCGTCGCG GAACTGGTCG ACGGGGTCAG CAAACTGACC CAGATGAATT TCGAGACCAA GGCCGAAGCC CAGGCGGAAA ACTTCCAGAA AATGGCCATG GCCATGGCGC GCGACATTCG CGTCATCCTG GTCAAGCTCG CTGATCGCCT GCACAACATG CGCACGCTGG AAGTCCTGTC CGGCGAAAAG CGTCGGCGCA TCGCCAAGGA AACCCTTGAA ATCTATGCGC CCATCGCCAA TCGGCTGGGC ATGCACAGTG TGCGCATCGA ATTCGAGGAC CTGGGCTTCA AGGCGATGTA CCCGATGCGT TCCTCGCGAA TCAACCAGGC GGTCAAGCGC GCCAGGGGCA ATCGCAAGGA ACTGGTCAAC AAGATCGAAG AGTCCCTGAG TCATTGCCTG GCCGTCGATG GCATCGAAGG CGACGTCAGT GGGCGGCAGA AACATCTGTA TGGCATCTAC AAGAAGATGC GCGGCAAGCG TCGCGCCTTC AACGAGATCA TGGATGTCTA CGCGTTCCGC ATCATCGTCG ACAAGGTCGA CACCTGCTAT CGCGTGCTCG GCGCTGTACA TAATCTGTAC AAGCCGCTGC CCGGTCGCTT CAAGGATTAC ATCGCGATCC CCAAGGCCAA CGGCTATCAG TCCCTGCACA CGACATTGTT CGGCATGCAT GGCGTGCCTA TCGAGATCCA GATTCGCACC CGCGAAATGG AAGAAATGGC CAACAACGGT ATCGCGGCAC ACTGGCTGTA CAAGTCCAGT GACGACGAGC AGCCCAAGGG CACTCACGCC CGGGCCCGAC AATGGGTCAA GGGCGTGCTG GAAATGCAGC AGCGCGCCGG CAACTCGCTG GAATTCATCG AAAGCGTCAA GATCGACCTG TTCCCGGACG AGGTCTACGT TTTCACGCCC AAAGGCCGGA TCATGGAGCT GCCCAAAGGC TCCACAGCGG TGGATTTCGC CTACGCGGTA CACACCGATG TCGGCAACAG CTGCATTGCC TGCCGGATCA ACCGCCGGCT GGCGCCGCTT TCCGAACCGC TGCAAAGTGG CTCGACCGTC GAGATCGTCA GCGCTCCAGG CGCACGCCCG AACCCGGCCT GGCTGAACTT TGTCGTCACC GGCAAGGCGC GTACCCACAT TCGTCACGCA CTCAAGCTGC AACGCCGTTC CGAGTCGATC AATCTGGGCG AGCGCCTGCT GAACAAGGTC CTCAACGGGT TTGAGTGCAG CCTCGACAAG ATCGGTCAGG AGCGCATTCA ACTGGTGCTC AACGAATACC GGGTCGAAGT GCTGGAAGAC CTGCTCGAAG ACATCGGCCT GGGTAATCGC ATGGCTTATG TCGTTGCCCG CCGCCTGCTG GGCGAAGGCG ATCAGTTGCC AAGCCCTGAA GGCCCGCTGG CGATTCGTGG CACCGAAGGC CTGGTGCTCA GCTACGCGAA ATGCTGCACG CCAATCCCGG GCGACCCGAT TGTCGGCCAC CTGTCTGCAG GCAAGGGCAT GGTCGTGCAC CTGGACAACT GCCGCAACAT CAGCGAAATC CGCCACAACC CGGAAAAATG CATCCAGCTG TCCTGGGCCA AGGACGTGAC GGGCGAATTC AACGTCGAAC TGCGCGTCGA ACTCGAGCAT CAGCGCGGCC TGATCGCGCT GCTGGCCAGC AGCGTCAACG CGGCGGACGG CAATATCGAA AAAATCAGCA TGGACGAACG CGATGGTCGC ATCAGCGTGG TCCAACTGGT GGTCAGCGTG CACGATCGCG TGCACCTGGC TCGTGTGATC AAGAAACTGC GCGCCCTGAC CGGTGTCACA CGCATCACCC GGATGCGCGC GTAG
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Protein sequence | MARGSALPSI DALADRLSAY LGKDQVNLVR RAYFYAEQAH DGQRRRSGEA YVTHPLAVAN ILADMHMDHQ SLMAAMLHDV IEDTGIAKEA LSAQFGETVA ELVDGVSKLT QMNFETKAEA QAENFQKMAM AMARDIRVIL VKLADRLHNM RTLEVLSGEK RRRIAKETLE IYAPIANRLG MHSVRIEFED LGFKAMYPMR SSRINQAVKR ARGNRKELVN KIEESLSHCL AVDGIEGDVS GRQKHLYGIY KKMRGKRRAF NEIMDVYAFR IIVDKVDTCY RVLGAVHNLY KPLPGRFKDY IAIPKANGYQ SLHTTLFGMH GVPIEIQIRT REMEEMANNG IAAHWLYKSS DDEQPKGTHA RARQWVKGVL EMQQRAGNSL EFIESVKIDL FPDEVYVFTP KGRIMELPKG STAVDFAYAV HTDVGNSCIA CRINRRLAPL SEPLQSGSTV EIVSAPGARP NPAWLNFVVT GKARTHIRHA LKLQRRSESI NLGERLLNKV LNGFECSLDK IGQERIQLVL NEYRVEVLED LLEDIGLGNR MAYVVARRLL GEGDQLPSPE GPLAIRGTEG LVLSYAKCCT PIPGDPIVGH LSAGKGMVVH LDNCRNISEI RHNPEKCIQL SWAKDVTGEF NVELRVELEH QRGLIALLAS SVNAADGNIE KISMDERDGR ISVVQLVVSV HDRVHLARVI KKLRALTGVT RITRMRA
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