Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0194 |
Symbol | |
ID | 3365670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 205070 |
End bp | 205804 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637650537 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_233305 |
Protein GI | 66043464 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACA TTCAAGGCAA GGTTGTACTG ATCACCGGCG CCAGCAGCGG CATTGGCGAA GCTGCCGCCC GACTCATCGC CGCCAAGGGC GCACACGTGG TACTGGGCGC TCGGCGCAGC GAGCGTCTGC AGACGCTGGC GGCAGACATC GAAGCGCAGG GCGGCTCGGC ACGCTTCCGC GCGCTGGACG TGACCGATGC GCTCGACATG CAAGCCTTTG CCGACTTCGC CACACATGAG TTCGGCAAGA TTGACGTGAT CATCAACAAC GCCGGCGTTA TGCCCCTGTC GCCGCTCGCC GCGCTGAAAA TCGCAGAGTG GAACCAGATG CTCGACGTCA ACGTGCGCGG CGTACTGCAC GGCATCGCCG CCGTGCTGCC GAGTATGCAA GCGCAAGGGC ACGGCCAGAT CATCAACATC TCGTCCATCG GCGGCCTCGC CGTTTCCCCG ACCGCCGCAG TGTACTGCGC CACCAAATTC GCTGTTCGCG CCATCTCCGA CGGCCTTCGG CAGGAAACCG ACAAAATCCG CGTCACCGTC GTCTGCCCCG GCGTGGTCGA ATCAGAACTG GCGGACTCGA TTTCCGACGA GACCGCGCGC GAGGCGATGA AAGCGTTTCG AAAGGTTGCC CTGGAGCCGG ATGCGATCGC ACGTGCGCTT GTTTATGCAA TCGAGCAGCC GGACGGGGTG GATGTGAGCG AGATTGTGGT GCGGCCTACG GGGAGTGCTT ATTGA
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Protein sequence | MSNIQGKVVL ITGASSGIGE AAARLIAAKG AHVVLGARRS ERLQTLAADI EAQGGSARFR ALDVTDALDM QAFADFATHE FGKIDVIINN AGVMPLSPLA ALKIAEWNQM LDVNVRGVLH GIAAVLPSMQ AQGHGQIINI SSIGGLAVSP TAAVYCATKF AVRAISDGLR QETDKIRVTV VCPGVVESEL ADSISDETAR EAMKAFRKVA LEPDAIARAL VYAIEQPDGV DVSEIVVRPT GSAY
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