Gene Psyr_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0194 
Symbol 
ID3365670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp205070 
End bp205804 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content63% 
IMG OID637650537 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_233305 
Protein GI66043464 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACA TTCAAGGCAA GGTTGTACTG ATCACCGGCG CCAGCAGCGG CATTGGCGAA 
GCTGCCGCCC GACTCATCGC CGCCAAGGGC GCACACGTGG TACTGGGCGC TCGGCGCAGC
GAGCGTCTGC AGACGCTGGC GGCAGACATC GAAGCGCAGG GCGGCTCGGC ACGCTTCCGC
GCGCTGGACG TGACCGATGC GCTCGACATG CAAGCCTTTG CCGACTTCGC CACACATGAG
TTCGGCAAGA TTGACGTGAT CATCAACAAC GCCGGCGTTA TGCCCCTGTC GCCGCTCGCC
GCGCTGAAAA TCGCAGAGTG GAACCAGATG CTCGACGTCA ACGTGCGCGG CGTACTGCAC
GGCATCGCCG CCGTGCTGCC GAGTATGCAA GCGCAAGGGC ACGGCCAGAT CATCAACATC
TCGTCCATCG GCGGCCTCGC CGTTTCCCCG ACCGCCGCAG TGTACTGCGC CACCAAATTC
GCTGTTCGCG CCATCTCCGA CGGCCTTCGG CAGGAAACCG ACAAAATCCG CGTCACCGTC
GTCTGCCCCG GCGTGGTCGA ATCAGAACTG GCGGACTCGA TTTCCGACGA GACCGCGCGC
GAGGCGATGA AAGCGTTTCG AAAGGTTGCC CTGGAGCCGG ATGCGATCGC ACGTGCGCTT
GTTTATGCAA TCGAGCAGCC GGACGGGGTG GATGTGAGCG AGATTGTGGT GCGGCCTACG
GGGAGTGCTT ATTGA
 
Protein sequence
MSNIQGKVVL ITGASSGIGE AAARLIAAKG AHVVLGARRS ERLQTLAADI EAQGGSARFR 
ALDVTDALDM QAFADFATHE FGKIDVIINN AGVMPLSPLA ALKIAEWNQM LDVNVRGVLH
GIAAVLPSMQ AQGHGQIINI SSIGGLAVSP TAAVYCATKF AVRAISDGLR QETDKIRVTV
VCPGVVESEL ADSISDETAR EAMKAFRKVA LEPDAIARAL VYAIEQPDGV DVSEIVVRPT
GSAY