| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0173 |
|---|
| Symbol | |
|---|
| ID | 3365649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 186867 |
|---|
| End bp | 187772 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637650516 |
|---|
| Product | S6 modification enzyme RimK |
|---|
| Protein accession | YP_233284 |
|---|
| Protein GI | 66043443 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG CTGTGCTTTC GCGTAATCCG CGTCTGTATT CCACCCGTCG TCTGGTCGAA
GCTGGCATCG AGCGTGGCCA TGAGATGGTG GTGATCGACA CCCTGCGCGC CTATATGAAC
ATCGCCAGCC ACAAGCCGCA GATCCACTAC CGCGGCAAAC CTCTGGAGGG CTTCGATGCG
GTGATCCCGC GCATCGGTGC TTCGGTGACT TTCTATGGCT GTGCGGTGTT GCGTCAGTTT
GAAATGATGG GTGTGTTTCC GCTCAATGAA TCGGTCGCCA TTGCCCGTTC GCGGGACAAG
CTGCGTTCGC TGCAACTCCT GTCACGCCGG GGGATCGGCT TGCCGGTCAC CGGTTTCGCT
CACTCGCCCG ACGACATTCC CGACCTGATC CAGATGGTCA ACGGCGCGCC GCTGGTCATC
AAGGTGCTCG AAGGCACTCA GGGGATCGGC GTGGTGTTGT GCGAAACGGC CACGGCGGCC
GAATCGGTGA TCGAAGCCTT CATGGGCCTC AAGCAGGACA TCATGGTTCA GGAATACATC
AAGGAAGCAG GCGGTGCCGA CATTCGCTGC TTTGTGGTCG GTGACAAGGT TATCGCCTCG
ATGAAACGTC AGGCCAAACC GGGCGAGTTC CGCTCCAACC TGCACCGCGG TGGCAGCGCC
AGCCTGATCA AAATCACGCC TGAAGAACGC ATGACTGCAT TGCGTGCAGC CAAGGTCATG
GGGCTGAGCG TGGCGGGTGT GGATATCCTG CGTTCCAATC ACGGTCCTTT GGTGATGGAG
GTCAACTCTT CGCCTGGCCT GGAAGGCATT GAAGTGACCA CCAGCAAGGA CGTGGCCGGG
ATGATCATCG GGTACCTGGA GAAAAACAGC GGCCCGCACA TGACCCGCAC CAAAGGAAAA
GGCTGA
|
|---|
| Protein sequence | MKIAVLSRNP RLYSTRRLVE AGIERGHEMV VIDTLRAYMN IASHKPQIHY RGKPLEGFDA
VIPRIGASVT FYGCAVLRQF EMMGVFPLNE SVAIARSRDK LRSLQLLSRR GIGLPVTGFA
HSPDDIPDLI QMVNGAPLVI KVLEGTQGIG VVLCETATAA ESVIEAFMGL KQDIMVQEYI
KEAGGADIRC FVVGDKVIAS MKRQAKPGEF RSNLHRGGSA SLIKITPEER MTALRAAKVM
GLSVAGVDIL RSNHGPLVME VNSSPGLEGI EVTTSKDVAG MIIGYLEKNS GPHMTRTKGK
G
|
|---|
| |