Gene Psyr_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0135 
Symbol 
ID3365611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp144401 
End bp145225 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID637650478 
ProductTonB, C-terminal 
Protein accessionYP_233246 
Protein GI66043405 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG CGGTCATAAT GAAAGCGGTC CCCTCTCCCT CGCCCGATGA CACTTCGACG 
GCGTGGCAGG GTATTCCTTT CAGCGCCAAT ACGTCACGCC CGGGCGGCCT TAACAAGCCG
CAAGTAATGG TGTTGATTGC TGCGTCGGTA CTTATTCATG GTGTGATCTG GTGGTACATG
CAAACGGCCC AGCCAGACGT GCCGGAAGTT GCGCCACAAG TTCCGGAAAT GACCATTGAA
CTGACCAGCC CGACACCACC CGCACCGGAA CCGCCGCCGC CCGAGCCACC ACCTCCGCCG
CCGCCTCCAC CGCCTCCCCC CGAACCGGAA CAACCGGTCG AGGACCCGGA CGCGGTCGAA
CCGCCGCCCA AACCGGTGGA AAAACCCAAG GTCGAGAAGC CCAAGCCGGT CAAGAAAGTC
GAACCGGTGA AAAAGCCTAC GCCGCCTGCG CCAACGCCTG CCGCCGCACC CAGCCCGCCC
GCGCCGCCAA CACCTGCGCC CGCGCCGCCG GCACCTGCTG CGCCACCGGC TCCGGTCAAG
GAAAGCGCTG CGGTATCCGG GCTCGCCAGC CTGGGCAATC CACCGCCGGA ATACCCGGGG
CTGGCCTTGC GACGCAGTTG GGAAGGTCGC GTGATTCTGC GCATCAAGGT GCTGCCCAAT
GGCCGCGCCG GGGCTGTCGA GGTGACCAAA TCCAGCGGCA AACCGGTACT GGACGAAGCG
GCCGTGGAGG CTGTGCGCAA CTGGAAGTTC ATACCGGCCA AACGCGGTGA CACGCCGATA
GAAGGCTTCG CGACGCAGAC CATCGACTTC AAGTTGCCGG AATGA
 
Protein sequence
MNDAVIMKAV PSPSPDDTST AWQGIPFSAN TSRPGGLNKP QVMVLIAASV LIHGVIWWYM 
QTAQPDVPEV APQVPEMTIE LTSPTPPAPE PPPPEPPPPP PPPPPPPEPE QPVEDPDAVE
PPPKPVEKPK VEKPKPVKKV EPVKKPTPPA PTPAAAPSPP APPTPAPAPP APAAPPAPVK
ESAAVSGLAS LGNPPPEYPG LALRRSWEGR VILRIKVLPN GRAGAVEVTK SSGKPVLDEA
AVEAVRNWKF IPAKRGDTPI EGFATQTIDF KLPE