Gene Psyr_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0122 
Symbol 
ID3365598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp131737 
End bp132393 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content52% 
IMG OID637650465 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_233233 
Protein GI66043392 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.601025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCC TCATCGTCAC CGCTCATCCA GAGTCACAGT CGCTCACCCA TTCCATCGCT 
GCGAGGGTGG CCAAAGGTAT CGTACTAGGT GATTCTGCCT CAGTCGTAGA GGTCGCCAAC
CTCGCGCAAG AAGCATTCAA TCCTTGCTTC ACTGAGGCTG ACCTGCAGGT ACATCGCCAC
AAAGCCTCTC CCCCACTTGA TGTTCAGCGA GAGCAAGCGC GTATAGAGCG TGCCGATACC
CTCATCCTGG TTTACCCAAC TTACTGGTGG TCCATGCCTG CACTTCTCAA GGGTTGGATT
GACCGAGTGT TCTCCAATGG TTGGGCCTTT GATTTCGATC CAGAGGGCTC TCTTACAAAG
AAGCTCGGAA AGTTGTCAGT ACATTTGATA GGCATAGGCG GCGCTGATCC GTTGACCTAC
GAACGCCACG GCTACGGCAC TGCTATGAAA ACGCAGATGG ACCAAGGTAT CTTTGGTTAT
TGTGGGGCTG AAGTGCATAT TTCGAAGCTA TTGCTGAATA GCGAAAACTC AGGTGCCGTT
CATGCTCTGG AAATGGCCGA ACAGTTGGGA CGCATTATCA GCAGCGAAGC CTCACCTTCA
ACGGCAGATA CTGAAAGTCT CTATTATCGA GAACATGCCG GTCCCAACCT CAAATAG
 
Protein sequence
MHVLIVTAHP ESQSLTHSIA ARVAKGIVLG DSASVVEVAN LAQEAFNPCF TEADLQVHRH 
KASPPLDVQR EQARIERADT LILVYPTYWW SMPALLKGWI DRVFSNGWAF DFDPEGSLTK
KLGKLSVHLI GIGGADPLTY ERHGYGTAMK TQMDQGIFGY CGAEVHISKL LLNSENSGAV
HALEMAEQLG RIISSEASPS TADTESLYYR EHAGPNLK