Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0104 |
Symbol | |
ID | 3365580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 115713 |
End bp | 116873 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637650448 |
Product | hypothetical protein |
Protein accession | YP_233216 |
Protein GI | 66043375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTCA AAATATTTGT GAGTTACGCC AAAGAAGACA GGTTGCAAGC ACTGAAGTAT TACGACCTCC TTGTACATGA TGGCATGGTT CCATGGATCG ATGTGAAGCA CATCCTGCCG GGACAAAATT GGGAAGCGGA GATCGACAAA GCTTTCCTGG AGGCAAATGT TGTAATGCTG CTGCTTAGCA ATAAGAGCGT TAACAAACGT GGTTTCGTTC AAAGGGAGGC AAACGACGCT ATAGAGCGCC TCAGGTACAA ACAGCCAACT GACATCTATG TGTTACCTCT ACTACTGGAG CAATGTGAGG TACCTACTCA TATATCTGGA CGCCTCCAAT ATATTGATTT AACTACGACG GGAGCATGGA TACAGGTTCA AGCATCTCTT CAATTAGCTG CTGAGCAACA GTCCATAGAA ATTAAACATG GTTCAAACGC AGGCCCGTTT AAAGTTTTCT CAGAGCAGTT AAAGGATTAT TGGGAAGGCG CCCCTGGGCA TGATATTAAA ATTGAATATC CTCGCTTTGA GTCGGCCTCT TTGAAGAGCG CCGCAGAAGA ATTATCGCTT TATTTCGGTG GGCGGGCGAC TCTAGGGCTG ATCAAATCTA GACAGAAGCC TTGGGACCAG CAAAAGGATT TATTCCCGGA AACCGGAGGG TACATATCTC TAAATGGCCG CTGGGATGGG TTCGGGGTCG TACATGCAAC CGACGAAATT CTGAGTTTGA TTTACGAAGT TAGTTGGTAC GGGGCTGGTG CCGCACACCC AAATTCCCAT TTTGAAACCT ATAATTTTTC CTTACATGAG CGTCTGCTAC TTTTGAGTCT CGACGATTTT TTTTGTGACC ACACAGCTGC GTTACAACGC ATCAGCGAGC TGTGTATCGC AGAGTTGTGT AGGGAGTATT GGAGGAGAAC CGGCGAAAAA CCCGGTGAAG ATCAAGTTGA ATGGTTCACG AATGGCGCGG CGGGTACTGA GGAAAATCTC AGTGCATTCA CAGTTGGCGC AAACCATTTC ACATTTCTAT TTGCACCATA CCAAGTGAGC TCCTATGCAG ATGGAAGATG GAGCGTGGAA ATTTCTTTCT ATGACCTTCT GGAATTCCTA AAACCAGATG GGCCCCACAC GTACGCAGCG GTAAGGCTAG GTCTGGAATA G
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Protein sequence | MSLKIFVSYA KEDRLQALKY YDLLVHDGMV PWIDVKHILP GQNWEAEIDK AFLEANVVML LLSNKSVNKR GFVQREANDA IERLRYKQPT DIYVLPLLLE QCEVPTHISG RLQYIDLTTT GAWIQVQASL QLAAEQQSIE IKHGSNAGPF KVFSEQLKDY WEGAPGHDIK IEYPRFESAS LKSAAEELSL YFGGRATLGL IKSRQKPWDQ QKDLFPETGG YISLNGRWDG FGVVHATDEI LSLIYEVSWY GAGAAHPNSH FETYNFSLHE RLLLLSLDDF FCDHTAALQR ISELCIAELC REYWRRTGEK PGEDQVEWFT NGAAGTEENL SAFTVGANHF TFLFAPYQVS SYADGRWSVE ISFYDLLEFL KPDGPHTYAA VRLGLE
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