Gene Psyr_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0104 
Symbol 
ID3365580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp115713 
End bp116873 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content47% 
IMG OID637650448 
Producthypothetical protein 
Protein accessionYP_233216 
Protein GI66043375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA AAATATTTGT GAGTTACGCC AAAGAAGACA GGTTGCAAGC ACTGAAGTAT 
TACGACCTCC TTGTACATGA TGGCATGGTT CCATGGATCG ATGTGAAGCA CATCCTGCCG
GGACAAAATT GGGAAGCGGA GATCGACAAA GCTTTCCTGG AGGCAAATGT TGTAATGCTG
CTGCTTAGCA ATAAGAGCGT TAACAAACGT GGTTTCGTTC AAAGGGAGGC AAACGACGCT
ATAGAGCGCC TCAGGTACAA ACAGCCAACT GACATCTATG TGTTACCTCT ACTACTGGAG
CAATGTGAGG TACCTACTCA TATATCTGGA CGCCTCCAAT ATATTGATTT AACTACGACG
GGAGCATGGA TACAGGTTCA AGCATCTCTT CAATTAGCTG CTGAGCAACA GTCCATAGAA
ATTAAACATG GTTCAAACGC AGGCCCGTTT AAAGTTTTCT CAGAGCAGTT AAAGGATTAT
TGGGAAGGCG CCCCTGGGCA TGATATTAAA ATTGAATATC CTCGCTTTGA GTCGGCCTCT
TTGAAGAGCG CCGCAGAAGA ATTATCGCTT TATTTCGGTG GGCGGGCGAC TCTAGGGCTG
ATCAAATCTA GACAGAAGCC TTGGGACCAG CAAAAGGATT TATTCCCGGA AACCGGAGGG
TACATATCTC TAAATGGCCG CTGGGATGGG TTCGGGGTCG TACATGCAAC CGACGAAATT
CTGAGTTTGA TTTACGAAGT TAGTTGGTAC GGGGCTGGTG CCGCACACCC AAATTCCCAT
TTTGAAACCT ATAATTTTTC CTTACATGAG CGTCTGCTAC TTTTGAGTCT CGACGATTTT
TTTTGTGACC ACACAGCTGC GTTACAACGC ATCAGCGAGC TGTGTATCGC AGAGTTGTGT
AGGGAGTATT GGAGGAGAAC CGGCGAAAAA CCCGGTGAAG ATCAAGTTGA ATGGTTCACG
AATGGCGCGG CGGGTACTGA GGAAAATCTC AGTGCATTCA CAGTTGGCGC AAACCATTTC
ACATTTCTAT TTGCACCATA CCAAGTGAGC TCCTATGCAG ATGGAAGATG GAGCGTGGAA
ATTTCTTTCT ATGACCTTCT GGAATTCCTA AAACCAGATG GGCCCCACAC GTACGCAGCG
GTAAGGCTAG GTCTGGAATA G
 
Protein sequence
MSLKIFVSYA KEDRLQALKY YDLLVHDGMV PWIDVKHILP GQNWEAEIDK AFLEANVVML 
LLSNKSVNKR GFVQREANDA IERLRYKQPT DIYVLPLLLE QCEVPTHISG RLQYIDLTTT
GAWIQVQASL QLAAEQQSIE IKHGSNAGPF KVFSEQLKDY WEGAPGHDIK IEYPRFESAS
LKSAAEELSL YFGGRATLGL IKSRQKPWDQ QKDLFPETGG YISLNGRWDG FGVVHATDEI
LSLIYEVSWY GAGAAHPNSH FETYNFSLHE RLLLLSLDDF FCDHTAALQR ISELCIAELC
REYWRRTGEK PGEDQVEWFT NGAAGTEENL SAFTVGANHF TFLFAPYQVS SYADGRWSVE
ISFYDLLEFL KPDGPHTYAA VRLGLE