Gene Psyr_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0095 
Symbol 
ID3365571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp104951 
End bp106369 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content57% 
IMG OID637650439 
Producttransposase IS4 
Protein accessionYP_233207 
Protein GI66043366 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA TCCAAGGAGA GTCTCGCAGC CAGACCAGTC TATTCCCGGT CTCGCTGGAA 
GAGTTGATCC CTGAGGATCA CCTCGTTCGG GTCATAGACC TATACGTCGC CAAGCTGGAT
TTGGTGCAAC TGGGTTTTGA TAAAGCGCTT CCCAAGAACA CCGGTCGCCC GTCCTATGAC
CCCGCCGATC AGCTCAAGCT GTACCTCTAC GGCTATTTCC AGCGGATTCG CTCATCGCGG
CGTCTTGAAG CCGAGTGTCA GCGCAATATC GAAGTGATTT GGCTGATTAA CCGACTCAAA
CCCGATTTCA AGACCATCGC CGACTTTCGT AAAAACAACA AACTTGCCTT TGTGGCGACG
TGTCGCGCCT TCGTTCGATT CTGCCGCATG GCGGGTCTGA TCGCAGGCGA CTTGGTGGCC
ATCGATGGCA GTAAGTTTCA GGCTGTCGCT TCCTCGCGGC GTCACATGAA CCTCAAACAA
CTCAAGCGTC AGGAAGAAAA GCTGGACAAG CGCATAGCTC AGTATCTGGC GGAGCTGGAT
GAGGCCGACA AGGCCGAGGC TGGAGAGGTG ATTGATCGCG GCGCGATCAA AACAGCACTG
GCGCAGCTTG AAGTTCGGCA GCACGACAAT CAGAGCTGCC AAGCGTTGAT GAGCTCGATG
GGCCTGGAGC AGTTCAACAC CCATGAAAGC GATGCCCGAA TGATGCGTAC GCCCAAAGGG
CCACGGGTGG CCTACAACGT ACAAACCGCC GTGGACGCCG CACATTGCCT GATTCTGCAC
CATGAAGTGA CTCAGGACGG CGATGACCGA AAACAGCTGG AGCCAATGGC CAAAGCCGCC
AAAGAACATC TGGAACAAGA TGCCTTGAGC GTGACGGCCG ATGCCGGCTA TTCAAACGGC
CAGCAGTTTC AGGCCTGCGA GGAGGCTGGG ATAACGGTCT ATGTGCCGCC CAATCGCACG
GTCAACCCAG GCGGTGAGGA ACTCTTTGAG CGCAAAGACT TTACCTACGA AGCCGAACAC
GATCGTTATC AGTGCCCGGC GGGCAAATGG TTGACGCTCA AGCAGCGCAA CAGGGGCGAT
CGGATCTATC AGGCACATGT CAGCGACTGC GCCGCCTGCC CACTCAAATC CCGATGCACT
GGCGCTCAAC GCCGCTATGT CTCACGCCAT GCCCATGAGG CAGCCTTTGA GCGAATGGAG
CAGCGAATGC TCGCGCATCC GCAAATGATG GCCAGTCGAA GATCCATCGT TGAGCATCCT
TTCGGCAATC TCAAGCAATG GCTGTTGGGG AATGGTCGCT TCCTGCTGCG CCAGTTGGAG
GGAGCAAAAG CGGAAATGGC CTTGGCGGTG AATGCTTACA ACCTCAAGCG AGCGATTAGC
GTACTCGGAG CCCGCCAATT GATGGCGCTA ATGGGCTGA
 
Protein sequence
MAYIQGESRS QTSLFPVSLE ELIPEDHLVR VIDLYVAKLD LVQLGFDKAL PKNTGRPSYD 
PADQLKLYLY GYFQRIRSSR RLEAECQRNI EVIWLINRLK PDFKTIADFR KNNKLAFVAT
CRAFVRFCRM AGLIAGDLVA IDGSKFQAVA SSRRHMNLKQ LKRQEEKLDK RIAQYLAELD
EADKAEAGEV IDRGAIKTAL AQLEVRQHDN QSCQALMSSM GLEQFNTHES DARMMRTPKG
PRVAYNVQTA VDAAHCLILH HEVTQDGDDR KQLEPMAKAA KEHLEQDALS VTADAGYSNG
QQFQACEEAG ITVYVPPNRT VNPGGEELFE RKDFTYEAEH DRYQCPAGKW LTLKQRNRGD
RIYQAHVSDC AACPLKSRCT GAQRRYVSRH AHEAAFERME QRMLAHPQMM ASRRSIVEHP
FGNLKQWLLG NGRFLLRQLE GAKAEMALAV NAYNLKRAIS VLGARQLMAL MG