Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0095 |
Symbol | |
ID | 3365571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 104951 |
End bp | 106369 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637650439 |
Product | transposase IS4 |
Protein accession | YP_233207 |
Protein GI | 66043366 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTACA TCCAAGGAGA GTCTCGCAGC CAGACCAGTC TATTCCCGGT CTCGCTGGAA GAGTTGATCC CTGAGGATCA CCTCGTTCGG GTCATAGACC TATACGTCGC CAAGCTGGAT TTGGTGCAAC TGGGTTTTGA TAAAGCGCTT CCCAAGAACA CCGGTCGCCC GTCCTATGAC CCCGCCGATC AGCTCAAGCT GTACCTCTAC GGCTATTTCC AGCGGATTCG CTCATCGCGG CGTCTTGAAG CCGAGTGTCA GCGCAATATC GAAGTGATTT GGCTGATTAA CCGACTCAAA CCCGATTTCA AGACCATCGC CGACTTTCGT AAAAACAACA AACTTGCCTT TGTGGCGACG TGTCGCGCCT TCGTTCGATT CTGCCGCATG GCGGGTCTGA TCGCAGGCGA CTTGGTGGCC ATCGATGGCA GTAAGTTTCA GGCTGTCGCT TCCTCGCGGC GTCACATGAA CCTCAAACAA CTCAAGCGTC AGGAAGAAAA GCTGGACAAG CGCATAGCTC AGTATCTGGC GGAGCTGGAT GAGGCCGACA AGGCCGAGGC TGGAGAGGTG ATTGATCGCG GCGCGATCAA AACAGCACTG GCGCAGCTTG AAGTTCGGCA GCACGACAAT CAGAGCTGCC AAGCGTTGAT GAGCTCGATG GGCCTGGAGC AGTTCAACAC CCATGAAAGC GATGCCCGAA TGATGCGTAC GCCCAAAGGG CCACGGGTGG CCTACAACGT ACAAACCGCC GTGGACGCCG CACATTGCCT GATTCTGCAC CATGAAGTGA CTCAGGACGG CGATGACCGA AAACAGCTGG AGCCAATGGC CAAAGCCGCC AAAGAACATC TGGAACAAGA TGCCTTGAGC GTGACGGCCG ATGCCGGCTA TTCAAACGGC CAGCAGTTTC AGGCCTGCGA GGAGGCTGGG ATAACGGTCT ATGTGCCGCC CAATCGCACG GTCAACCCAG GCGGTGAGGA ACTCTTTGAG CGCAAAGACT TTACCTACGA AGCCGAACAC GATCGTTATC AGTGCCCGGC GGGCAAATGG TTGACGCTCA AGCAGCGCAA CAGGGGCGAT CGGATCTATC AGGCACATGT CAGCGACTGC GCCGCCTGCC CACTCAAATC CCGATGCACT GGCGCTCAAC GCCGCTATGT CTCACGCCAT GCCCATGAGG CAGCCTTTGA GCGAATGGAG CAGCGAATGC TCGCGCATCC GCAAATGATG GCCAGTCGAA GATCCATCGT TGAGCATCCT TTCGGCAATC TCAAGCAATG GCTGTTGGGG AATGGTCGCT TCCTGCTGCG CCAGTTGGAG GGAGCAAAAG CGGAAATGGC CTTGGCGGTG AATGCTTACA ACCTCAAGCG AGCGATTAGC GTACTCGGAG CCCGCCAATT GATGGCGCTA ATGGGCTGA
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Protein sequence | MAYIQGESRS QTSLFPVSLE ELIPEDHLVR VIDLYVAKLD LVQLGFDKAL PKNTGRPSYD PADQLKLYLY GYFQRIRSSR RLEAECQRNI EVIWLINRLK PDFKTIADFR KNNKLAFVAT CRAFVRFCRM AGLIAGDLVA IDGSKFQAVA SSRRHMNLKQ LKRQEEKLDK RIAQYLAELD EADKAEAGEV IDRGAIKTAL AQLEVRQHDN QSCQALMSSM GLEQFNTHES DARMMRTPKG PRVAYNVQTA VDAAHCLILH HEVTQDGDDR KQLEPMAKAA KEHLEQDALS VTADAGYSNG QQFQACEEAG ITVYVPPNRT VNPGGEELFE RKDFTYEAEH DRYQCPAGKW LTLKQRNRGD RIYQAHVSDC AACPLKSRCT GAQRRYVSRH AHEAAFERME QRMLAHPQMM ASRRSIVEHP FGNLKQWLLG NGRFLLRQLE GAKAEMALAV NAYNLKRAIS VLGARQLMAL MG
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