Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0084 |
Symbol | |
ID | 3365559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 90266 |
End bp | 91276 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637650427 |
Product | extracellular solute-binding protein |
Protein accession | YP_233196 |
Protein GI | 66043355 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATTC GCCGTTTTGC GCTGGCGGCT CTCGCCAGTG CTGTTTTCGC AGGTTCGGCT GTCGCCAAGG ATTACGAACT GCTCAACGTG TCCTACGATC CGACCCGCGA GCTGTATCAG GACTACAACG CAGAATTCGT CAATTTCTGG AAAAAATCCC ACCCGGACGA CAAGGTCGAG ATCAAGCAAT CTCACGGCGG CTCGGGCAAG CAGGCGCGTG GCGTGATCGA CGGCCTGCGT GCCGACGTGG TGACCCTGGC ACTGGCCGGT GACATCGACG AAATCGCCAG GCTCGGCAAG ACCCTGCCGG AAAACTGGCA GACCCGCCTG CCGGACGCGA GCACACCGTA CACCTCGACC ATCGTGTTTC TGGTGCGCAA GGGCAACCCG AAAGGCATCA AGGACTGGGG CGACCTGACC AAGGAAGGCG TCTCGGTGAT CACCCCCAAC CCGAAAACCT CGGGCGGTGC GCGCTGGAAC TTCCTGGCCG CCTGGGCCTA CGGCCTGAAG GCGGGCGGCG GTGACGAAGC CAAGGCCAAG GAATACGTAC AGACGCTGTT CAAGCACGTG CCGATCCTGG ACACCGGCGC GCGCGGTTCG ACCATCACCT TTGTCAACAA CGGTCAGGGT GACGTGCTGC TGGCGTGGGA AAACGAAGCG TTTCTGGCGT TGAAAGAAGA CGGCGGCAAG GACAAGTTCG ACATCGTCGT ACCGTCGCTG TCGATCCTTG CCGAACCTCC GGTCGCCGTG GTCGACAAGA ACGCCGAGCG GAAAGGCAAC AGCGAAATCG CGACTGAATA CCTCAAGCAC CTGTACAGCA AGGAAGGTCA GGAAATCGCC GCGAAAAACT TCTATCGTCC ACGTGATGCC GAAGTGGCCG CCAAGTACGA GAAGCAATTC CCGAAACTCG ATCTGGTGAC TATCGACAAA GACTTTGGTG GCTGGAAAAC TGCGCAGCCG AAGTTTTTCA ATGACGGCGG CGTGTTCGAT CAGATTTATC AGGCGCAATA A
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Protein sequence | MSIRRFALAA LASAVFAGSA VAKDYELLNV SYDPTRELYQ DYNAEFVNFW KKSHPDDKVE IKQSHGGSGK QARGVIDGLR ADVVTLALAG DIDEIARLGK TLPENWQTRL PDASTPYTST IVFLVRKGNP KGIKDWGDLT KEGVSVITPN PKTSGGARWN FLAAWAYGLK AGGGDEAKAK EYVQTLFKHV PILDTGARGS TITFVNNGQG DVLLAWENEA FLALKEDGGK DKFDIVVPSL SILAEPPVAV VDKNAERKGN SEIATEYLKH LYSKEGQEIA AKNFYRPRDA EVAAKYEKQF PKLDLVTIDK DFGGWKTAQP KFFNDGGVFD QIYQAQ
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