Gene Psyr_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0081 
Symbol 
ID3365556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp87481 
End bp88461 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content63% 
IMG OID637650424 
ProductABC transporter 
Protein accessionYP_233193 
Protein GI66043352 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID[TIGR00968] sulfate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG AAGTCCGTAA CGTCAGCAAG AACTTCAATG CCTTCAAGGC CCTGAACAAC 
ATCAGTCTGG ACATCCAGAG TGGCGAGCTG GTGGCTTTGC TGGGCCCGTC AGGCTGTGGC
AAGACCACCC TGCTGCGCAT CATTGCCGGC CTGGAAACCC CGGATGACGG CAGCATCGTG
TTCCATGGCG AAGATGTGTC CGGCCACGAC GTGCGTGATC GCAACGTCGG GTTCGTGTTC
CAGCACTACG CGCTGTTCCG CCACATGACG GTGTTCGACA ACGTCGCGTT CGGCCTGCGC
ATGAAGCCCA AGCGCGAGCG CCCGAACGAA ACGCGGATCG CCGAGAAGGT CCATGAGCTG
CTGAACATGG TGCAGCTGGA CTGGCTGGCC GACCGTTATC CGGAGCAACT GTCGGGTGGA
CAGCGCCAGC GAATCGCCCT GGCCCGCGCC CTGGCGGTCG AGCCCAAGGT GCTGCTGCTG
GACGAGCCGT TCGGCGCGCT GGACGCCAAG GTCCGCAAGG AGCTGCGTCG CTGGCTGGCG
CGCCTGCACG AAGACATCAA CCTGACCTCG GTGTTCGTGA CTCACGATCA GGAAGAGGCC
ATGGAAGTGG CTGACCGCAT CGTGGTGATG AACAAGGGCG TGATCGAACA GATCGGCTCG
CCGGGCGAGG TCTACGAGAA CCCGTCCAAC GACTTCGTCT ACCACTTCCT CGGCGACTCC
AATCGCCTGA GCCTGGGCGC GGAGGGTCAC CTGCTGTTCC GTCCGCATGA GGTGTCGCTG
TCCCGCCAGG AAATCGAAGA CCACCACGCC GCCGAAGTCC GCGACATCCG CCCGCTGGGC
GCGACGACGC GGGTCACGTT GAAAGTGGAA GGGCAGGACG AACTGATCGA GGCCGAAGTG
GTGAAAGACC ACGACAGCCT GGTGGGCCTG GCGAAGGGCG AAACGCTGTT CTTCAAACCG
AAGGTCTGGC AGAAGCTTTA A
 
Protein sequence
MSIEVRNVSK NFNAFKALNN ISLDIQSGEL VALLGPSGCG KTTLLRIIAG LETPDDGSIV 
FHGEDVSGHD VRDRNVGFVF QHYALFRHMT VFDNVAFGLR MKPKRERPNE TRIAEKVHEL
LNMVQLDWLA DRYPEQLSGG QRQRIALARA LAVEPKVLLL DEPFGALDAK VRKELRRWLA
RLHEDINLTS VFVTHDQEEA MEVADRIVVM NKGVIEQIGS PGEVYENPSN DFVYHFLGDS
NRLSLGAEGH LLFRPHEVSL SRQEIEDHHA AEVRDIRPLG ATTRVTLKVE GQDELIEAEV
VKDHDSLVGL AKGETLFFKP KVWQKL