Gene Psyr_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0072 
Symbol 
ID3365547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp75159 
End bp76079 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content61% 
IMG OID637650415 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_233184 
Protein GI66043343 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCA GTCTCCCTCC TCTTTACGCA CTAAGGGCTT TTGAAGCAGC TGCGCGGCAT 
ACCTCGTTTA CCCGAGCGGC CGAGGAACTT TCGATCACCC AAAGTGCAGT AAGCCGGCAT
ATTCGTACCC TGGAAGAGCA CTTTGCCTGC CGCTTGTTTC AGCGCAACGG GCGTAACTTG
CAGCTCACCG AGTCGGCACG CGCGCTGTTG CCCGGCGTGC GCGACGGGTT CCTGGCACTG
GAACGCGCTT GCAGCACCTT GCAGACCGAA GAAGGTATTC TGCGCATGAA AGCCCCGTCG
ACCCTGACCA TGCGCTGGCT GCTCGCGCGG CTCAGCCGTT TTCGTCATCT GCAGGTGGGC
AACGAGGTGC AACTGACCAG CGCGTGGATG GAAATCGATG CGGTGGACTT TACCCAGGAG
CCTTTCGATT GCGCGATTCT ACTCAGCCAG GGGCATTTCC CGTCGGACTG GGAAGCCACA
CTGCTGTTTC CCGAATTGCT GATTCCGGTC GGTGCGCCCA CCTTGTTGCA GGACCCGCCA
TGGGACGTGG AACGGCTGGC AAAGGCTGAA TTGCTGCATC CCACCCCTGA TCGCCGTGAC
TGGCGCACCT GGTTGAACCG CATGGGTCTG GCCGATCAGG TGTCGCTCAA AGGCGGGCAG
GTGTTCGACA CCCTGGAGCT GGGAATGATT GCCGCAGCAC GCGGCTACGG TGTGTCGATG
GGCGACCTGC TGATGGTCGC CGAGGACGTG GCGCAGGCGC GTCTGAGCCT GCCGTGGCGC
ACGGCGGTGT TCAGTGGCGA AAACTATTAT CTGGTCTGGC CGCGTACGAG GCCCGGCGCA
GAGCGGTTGC GACGCCTCAG CGATTTTCTT CAGGCGGAGG TGGGTGCCAT GAAGTTGCCG
TTAGTTGAAG TACTCTATTA A
 
Protein sequence
MPRSLPPLYA LRAFEAAARH TSFTRAAEEL SITQSAVSRH IRTLEEHFAC RLFQRNGRNL 
QLTESARALL PGVRDGFLAL ERACSTLQTE EGILRMKAPS TLTMRWLLAR LSRFRHLQVG
NEVQLTSAWM EIDAVDFTQE PFDCAILLSQ GHFPSDWEAT LLFPELLIPV GAPTLLQDPP
WDVERLAKAE LLHPTPDRRD WRTWLNRMGL ADQVSLKGGQ VFDTLELGMI AAARGYGVSM
GDLLMVAEDV AQARLSLPWR TAVFSGENYY LVWPRTRPGA ERLRRLSDFL QAEVGAMKLP
LVEVLY