Gene Psyr_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0060 
Symbol 
ID3365535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp59526 
End bp60701 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content63% 
IMG OID637650403 
Producthypothetical protein 
Protein accessionYP_233172 
Protein GI66043331 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA CCTGTCGTTT ACGCTATTAC GCCAAAATGC AAAGGATGGG ATACGTGAGC 
GAAACAGCCT TGCCTAAAGA CGAAGAATCG GTGTTGAAAA CGCCTGCATC CAAGCCTGAG
CCAGTCCGCA CCGAGCGCAC CGGCAGCCGC AACAGTGGCC TGGTATTCCT GGCCTTGCTG
CTGGCAATTG CCGGTATCGC CGTCGCCGGC TGGGGAGTCT GGCAACTGCG CATGTTGCAG
GCCGGGCACC AGCAACAGCG CGGACAGGTC GAGGACATCG CCGAACAGAC CCTGGTGCTG
GCGCAGAATG ACCAGCAACT GAGCGCACGT ATCGCGCAAT TCCCGCCAGC CAACCAACTG
GAAGACAGCC GCCGTCTGGT CGCGCAACTG CAAGGCGATC AGCAGCGTCT CAGCCAGCGA
CTCGAAACCG TGCTGGGGGC GAGCCGCAAG GACTGGCGTC TGGCCGAGGC CGAACATCTG
CTGCGTCTGG CCAGCCTGCG CCTTTCAGCG CTGCAGGACA TCAACAGCGC GCAGGCGCTG
GTTCAGGGTG CCGACGAAAT TCTGCGTGAG CAGGATGATC CAGGCTCCTT CGCTGCCCGC
GAGCAACTGG CCAAGAGCCT TGCCGCCCTG CGCAGCGTCG AGCAGCCGGA CCGCACCGGG
CTGTTTCTGC AACTGGCTGC CTTGCGTGAG CAGGCTGTAC AGCTCAACAA GCTGGCTCCC
GAATACGCAG ACAAGGGCGA GTCGCTTATG GGGCTGACCG CTGACAAGAC CGAAACCAGC
CGGTGGTCGC AGTGGTGGGA CGAGATCTCC CATTACTTCC GTATCGATTT CAACGCCGAC
AAGGACATCC GCCCGGTACT CGCCGGCCAG AGCCTTTCGC AGGTGCGTCT GGCCCTGAGC
CTGGCGCTGG AGCAGGCGCA GTGGGCAGCG CTTAACGGCG AGCCCGAGGT TTATTCCAAG
GCCATCACCG AAGCGCAGAG CGTTCTGAAA GCCAACTTCG ATCAGGACGA CCCACAGGGC
AAGGCGCTCG GCCAAGGGCT TGATGCCGTC GCCAGCCAGC CGGTATCGGT GAAGACACCG
GATCTGGCAC CAACCCTGAG CGCCGTGCAG GCCTACCTTG AACGCCGTCA CGCTGCCGGC
CAGCCAGCCG AGGCGCAACA GGGGACCAGC CGATGA
 
Protein sequence
MIDTCRLRYY AKMQRMGYVS ETALPKDEES VLKTPASKPE PVRTERTGSR NSGLVFLALL 
LAIAGIAVAG WGVWQLRMLQ AGHQQQRGQV EDIAEQTLVL AQNDQQLSAR IAQFPPANQL
EDSRRLVAQL QGDQQRLSQR LETVLGASRK DWRLAEAEHL LRLASLRLSA LQDINSAQAL
VQGADEILRE QDDPGSFAAR EQLAKSLAAL RSVEQPDRTG LFLQLAALRE QAVQLNKLAP
EYADKGESLM GLTADKTETS RWSQWWDEIS HYFRIDFNAD KDIRPVLAGQ SLSQVRLALS
LALEQAQWAA LNGEPEVYSK AITEAQSVLK ANFDQDDPQG KALGQGLDAV ASQPVSVKTP
DLAPTLSAVQ AYLERRHAAG QPAEAQQGTS R