Gene Psyr_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0051 
Symbol 
ID3365526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp51865 
End bp52458 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content63% 
IMG OID637650394 
Producthypothetical protein 
Protein accessionYP_233163 
Protein GI66043322 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGT TGGGCTTGCC GGTATCCGCG TACTGGCTTG AACCGCTGCT GGTGGGTGCG 
CAGATTCTGC TGATCCTGCT GGCCGGTTAC GTACTGCAAC GCATCGTGGG TGGTTTTCTG
ACCGGGCTGG GCGAGCGCTA TCCGTTGCCG CCAGAATTGC TGGTGCCGGT TCGCGGAGGC
CTGCGCTGGT TGATCATGGG CAGCGCCTTT GTCCTCGTCC TGGGTCGACT CGGGGTGTCG
GCCACGGTGC TGTGGACTGC ACTGTCCGGC TTCGTCGCCG TCGCGGCGGT GGCGTTCTTC
GCCATGTGGA GCGTGCTGTC GAACCTGCTC TGCGCCATTC TGATCTTCAC CATCGGCCCG
TTCCGCATCG GTGACATGGT CGAGCTGGTC GATACGCTGG ACAAGCCGGG CGTGAAGGGC
AGGGTGGTTG CCATCAACCT GATGTTCACC ACCCTGATCG AGACCCCGGA AGCCGGTGGT
GCGCTGGTCC AGGTGCCCAA CAGCCAGTTT TTCCAGAAGT CGGTGCGCCG TTGGCGTGGC
AGCGATCTGT TTCCGCAGAT GGTGGTCGCA AAGCAGCCGG ACGAGCAGGA TTAG
 
Protein sequence
MDMLGLPVSA YWLEPLLVGA QILLILLAGY VLQRIVGGFL TGLGERYPLP PELLVPVRGG 
LRWLIMGSAF VLVLGRLGVS ATVLWTALSG FVAVAAVAFF AMWSVLSNLL CAILIFTIGP
FRIGDMVELV DTLDKPGVKG RVVAINLMFT TLIETPEAGG ALVQVPNSQF FQKSVRRWRG
SDLFPQMVVA KQPDEQD