Gene Psyr_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0046 
Symbol 
ID3365521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp47937 
End bp48227 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content56% 
IMG OID637650389 
Producthypothetical protein 
Protein accessionYP_233158 
Protein GI66043317 
COG category[R] General function prediction only 
COG ID[COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR02443] conserved hypothetical metal-binding protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CACCAGTAGT CATTACCAGG AAACGCTTCA TCGCCGGGGC GGTGTGCCCG 
GCGTGCAGCG AGCCCGACAA ACTGATGATG TGGAACGAAA ACGACGTGCC GCATCGCGAG
TGCGTGAGTT GCGGCTACAG CGATACGCTC AACGAGCAGG GTATTTCGAT ACCGAAGGAG
TTGGGCACAC GGGTCAACAA GGTGGTGGTC AAACCGGCTG ATCCCAAGGT TCAGGGTGTA
CAGTTCTTCC CGAACCCGAA GTTGAAGAAG CCGGTTGATT TGAGCGACTA G
 
Protein sequence
MTDTPVVITR KRFIAGAVCP ACSEPDKLMM WNENDVPHRE CVSCGYSDTL NEQGISIPKE 
LGTRVNKVVV KPADPKVQGV QFFPNPKLKK PVDLSD