Gene Psyr_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0031 
Symbol 
ID3365506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp35445 
End bp36269 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content59% 
IMG OID637650374 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_233143 
Protein GI66043302 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATC TACTCATCGA CGGTAAGACA CTTCACTATT CCGACCAAGG CACCGGACCG 
GTGGTATTGC TCGGTCACAG CTATCTCTGG GACAAGGCGA TGTGGAGTGC ACAGATTGAT
ACGCTGGCCA GCCAGTATCG GGTGATCGTG CCGGATCTGT GGGGTCATGG CGATTCCAGC
GGGTTTCCTG AGGGCACTCG CAATCTCGAT GATCTGGCGC GGCATGCGCT GGCGCTGCTG
GATCATTTGA ATATCGAGCG TTGCAACATC GTAGGGTTGT CGGTCGGTGG CATGTGGGGC
GCCATTGCTG CGCTGCTCGC GCCAGAGCGC ATCACCGGGC TGGTGTTGAT GGACACCTAC
CTGGGCAAGG AGACCGAGGC CAAGAAAGCC TACTATTTCT CGTTGCTGGA CAAGCTGGAA
GAGGTCGGGA CCTTTCCTGA GCCGCTGCTG GATATCGTCG TACCGATCTT CTTCCGTCCC
GGTATTGATC CGCAGTTGCC TGTGTACAGG TCGTTTCGTG CGGCGCTTGC CGGCATGAAT
GCCGAGCAGT TGCGTCAGTC CGTCGTACCG CTGGGAAGGA TGATTTTCGG TCGTGATGAC
CGGCTCGGTT TGATCGAGCA ATTGAATGCC GACACCACGC TGGTGATGTG TGGCGATGCA
GACATTCCAC GCCCGCCCGA GGAGACGCGT GAGATGGCCA GCCTGATCGG CTGCCCTTAT
GTGCTGGTGC CTGAGGCCGG GCATATCGCC AATCTGGAAA ATCCGGCGTT CGTATCGGGT
GCGCTGATGA CGTTCCTGGC GCGGGTTAAC CAGAAGCAGG GTTGA
 
Protein sequence
MPDLLIDGKT LHYSDQGTGP VVLLGHSYLW DKAMWSAQID TLASQYRVIV PDLWGHGDSS 
GFPEGTRNLD DLARHALALL DHLNIERCNI VGLSVGGMWG AIAALLAPER ITGLVLMDTY
LGKETEAKKA YYFSLLDKLE EVGTFPEPLL DIVVPIFFRP GIDPQLPVYR SFRAALAGMN
AEQLRQSVVP LGRMIFGRDD RLGLIEQLNA DTTLVMCGDA DIPRPPEETR EMASLIGCPY
VLVPEAGHIA NLENPAFVSG ALMTFLARVN QKQG