Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0025 |
Symbol | aroE |
ID | 3365500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 28635 |
End bp | 29459 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650368 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_233137 |
Protein GI | 66043296 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGGT ACGTCGTCTT CGGTAATCCC ATCGGCCACA GCAAGTCGCC GTTGATTCAT CGCCTGTTTG CCGAGCAAAC CGGGCAAACG CTGGATTACC AAACCTCACT GGCACCGCTG GACGATTTCA CCGCGTTTGC CCAGGCGTTT TTCCAGGCCG GGCGTGGCGC CAACGTCACC GTGCCGTTCA AGGAACAAGC CTGGCGCCTG GCCGACAGCC TGACCCAACG TGCGCAGCGC GCCGGGGCGG TCAACACCCT GAGCAAGCTC GACGACGGAA CTCTGCTGGG CGATAACACT GACGGTGCGG GGCTGGTACG CGATCTGACG GTCAATTGCG GGCGCAGCCT GCGTGGTCAG CGCATTCTGT TGCTGGGCGC AGGCGGTGCG GTGCGTGGCG CGCTGGAGCC GTTGCTTGGG CAACAGCCCG CTGCGTTGGT GATCGCCAAT CGTACGGTCG AGAAAGCCGA GCGGCTGGCG CAGGAGTTCG CCGACCTCGG GCCTGTATTC GCCAGCAGCT TCGACTGGCT TGAAGAGTCG GTGGACGTGA TCATCAACGC CACCTCCGCC AGCCTGGCCG GAGAGCTGCC ACCGATTGCG CCCAGCCTGA TCCAGCCGGG AGTGACCTTC TGCTACGACA TGATGTACAG CAACGAGCCC ACTGCTTTTT GCCGTTGGGC CACCGAGCAC GGCGCGGCGC AGGCGGTGGA CGGTCTGGGC ATGCTGGTCG AGCAGGCCGC AGAAGCCTTT CTGCTGTGGC GCGGCGTGCG CCCGGATTCA GCGCCTGTAT TGGCGGAGTT GCGCAGATTG CTGGCTGCGG GTTGA
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Protein sequence | MDRYVVFGNP IGHSKSPLIH RLFAEQTGQT LDYQTSLAPL DDFTAFAQAF FQAGRGANVT VPFKEQAWRL ADSLTQRAQR AGAVNTLSKL DDGTLLGDNT DGAGLVRDLT VNCGRSLRGQ RILLLGAGGA VRGALEPLLG QQPAALVIAN RTVEKAERLA QEFADLGPVF ASSFDWLEES VDVIINATSA SLAGELPPIA PSLIQPGVTF CYDMMYSNEP TAFCRWATEH GAAQAVDGLG MLVEQAAEAF LLWRGVRPDS APVLAELRRL LAAG
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