Gene Psyr_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0023 
Symbol 
ID3365498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp26572 
End bp27549 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content64% 
IMG OID637650366 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_233135 
Protein GI66043294 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC GTATCCAGTT CAACACTGTC GGAGGACCCG AGGTTCTTGA ATATGTCGAT 
TTCGAGCCGC AGGCTCCGGG GCCGCAGGCG GTGGTGGTGC GTAACAAGGC CATTGGCCTG
AATTTCATCG ATACCTATTA CCGCAGCGGG CTGTATCCGG CGCCGTCGCT GCCTTCCGGC
CTCGGCGCCG AAGGGGCGGG GGTGGTCGAG GCGGTGGGGG CCGAGGTGAC GCGCTTCAAG
GTCGGTGATC GTGTCGCTTA CGGCACCGGA CCGCTGGGGG CGTACAGCGA AGTGCATGTG
CTGCCTGAAG CGAATCTGGT CAAGCTGGCG GACTCGATCA GTTTCGAGCA GGCCGCAGCC
CTGATGCTCA AGGGCCTGAC GGTGCAGTAT CTGCTGCGTC AGACCTATCA GGTGAAGCCG
GGCGAGATCA TTCTGTTTCA TGCCGCCGCA GGCGGGGTGG GCTCGCTGGC CTGTCAATGG
GTCAAGGCCC TGGGCGGCAA ACTGATCGGC ACGGTCAGTT CGCCGGAGAA GGCCGCTCAC
GCCAAGGCGC TTGGAGCCTG GGAAACCATT GATTACAGCC ACGAAGACGT CGCCAGCCGC
GTGCTGGAAC TGACCGACGG CAAGAAATGC CCGGTGGTCT ACGACGGGGT GGGCCAGGAC
ACCTGGCTGA CGTCACTTGA CTGTGTGGCG CCACGCGGGC TGGTGGTGAG CTTCGGCAAT
GCCTCCGGGC CGGTCTCGGG TGTGAACCTC GGGATTCTGG CGCAAAAGGG TTCGGTGTAT
GTCACCCGCC CGACGCTGGG CTCTTACGCC AACACTGCGC AGAACCTGCA GGCCATGGCT
GACGAGCTGT TCGACATGCT CGCCAGCGGC AAGCTCAAGG TCGACGGCAT TCAGCAGTAC
GCCCTGAAGG ACGCCGCCAG GGCGCAGACC GAGCTGTCGG CCCGGCGCAC CACTGGCTCG
ACCATTCTGA TCCCTTGA
 
Protein sequence
MAKRIQFNTV GGPEVLEYVD FEPQAPGPQA VVVRNKAIGL NFIDTYYRSG LYPAPSLPSG 
LGAEGAGVVE AVGAEVTRFK VGDRVAYGTG PLGAYSEVHV LPEANLVKLA DSISFEQAAA
LMLKGLTVQY LLRQTYQVKP GEIILFHAAA GGVGSLACQW VKALGGKLIG TVSSPEKAAH
AKALGAWETI DYSHEDVASR VLELTDGKKC PVVYDGVGQD TWLTSLDCVA PRGLVVSFGN
ASGPVSGVNL GILAQKGSVY VTRPTLGSYA NTAQNLQAMA DELFDMLASG KLKVDGIQQY
ALKDAARAQT ELSARRTTGS TILIP