Gene Psyr_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0015 
Symbol 
ID3365490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp16812 
End bp19175 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content62% 
IMG OID637650358 
Productoxidoreductase alpha (molybdopterin) subunit 
Protein accessionYP_233127 
Protein GI66043286 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR01701] oxidoreductase alpha (molybdopterin) subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.701694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CGGAAAACTC CCAGGCCCCG CTTCAGGGAT CACAGACCGA CGGCACGCCG 
GCAGGTGGCT GGGCCGCGCT CAGTGCGGTC AACAAGCACC TGTTGCACCA GCATGTGCTG
ATCAAGGGCA ACCGCACGCT GATGTCCATG AACAAGCCTG GCGGCTTCGA CTGCCCCAGC
TGCTCCTGGC CGGACCCGAA GAAGCCGCAC ACCTTTGAAT ACTGCGAGAA CGGTGCCAAG
GCCCTGGCCT GGGAATCGAC CAAGAAACGC GTGACTCCAG AGTTCTTCGC CCGGCATACG
GTCAGCGAAC TGGCCACCTG GAGCGACCAC GAGCTGGAAG CAGAAGGCCG TATTACCGAG
CCGATGCGCT ACGACGCCGC CACTGACAAA TACCTGCCCG TCACCTGGGA CGAGGCGTTC
GCCGAGATCG GCGAAGAACT GCGCAACCTG AGCGACCCGT GGAAGCTGGA GCTGTACACC
TCAGGGCGCA CATCGAACGA AGCCGCCTTT CTGTATCAGC TGTTTGGCCG GATGTACGGC
ATGGCCAACT TCCCTGACTG CTCGAACATG TGCCATGAGA CCACCACCGC GGCGCTGCCC
GAGTCGATCG GGGTCGGCAA AGGCACCACG ACGCTGGAGG ATTTCGAGAG CGCCGACGCG
ATTTTCATCA TCGGCCAGAA CCCCGGGACC AACAGCCCGC GCATGATGTC CGAGCTGCAC
GCCGCCGCGC GCCGGGGCGC GAGCATCATC TCGTTCAACC CGCTGCGGGA GAGGGCGCTG
GTACGTTTTG CGGCGCCGCA GGACCCGCGC GACATGCTCA GTCTGCATGG GGTGGAAATC
AGCTCGCAGT ACCATCAGGT CAGGATCGGC GGCGACATGA TCGCCCTGCA AGGCGTTTGC
AAGGCCGTGA TCGAAGCCGA CGACGTGGCG CAGCGTGAAC ACCTGCCACG TGTACTCGAT
GTGGCGTTCA TTGAAGAACA CACCCATGGC TTCGAGCAGT ACGCCGATTA CTGCCGACAG
TTGCCCTGGG ACATCATCGA GCGCCATTCG GGCCTGACGC GTCAGGCCAT CGAAGAGGTG
GCGGCGGTCT ATAAGCGCTC GAAGGGGGTC ATCTGCTGCT GGGGAATGGG CATCACTCAG
CACAAGCGCG GCGGTGACGC CATGCAGCAG ATCATCAACC TGCTGCTGTT ACGCGGCAAC
ATCGGCAAGC TTGGTGCGGG GGCGTGTCCG GTGCGTGGGC ATTCCAACGT ACAGGGCGAC
AGGACGATGG GCATCTACGA AAAGGCCGGC GAACCGTTTC TGGCCAGCAT GAGCAAGGTG
TTCGGTTTCG AGGCGTCCAG AAAAAAAGGT CACGCTGTGG CCGAGACCTG CGAAGCCCTG
TTGCGTGGCG AGGTGGAAGC GCTGATTTCC ATGGGCGGTA ATTTTTTCCG CGCCATTCCG
GACACCGATG TGATCTGCCC GACCGTCAGC CGCCTGAAAA TGACGGTGCT GGTCAACACC
AAGCTCAACC GCAGCGCGAC AGTCCATGGT CAGAAGGCCT TTCTGCTGCC GTGCGTGGCA
CGTTCGGAGC GCGACCTGCA GAACGGTGTG GCGCAAACCA TTACGGTGGA GGACTCGATG
TCGATGGTGC ACGGCTCGAC CGGCATGCTT GAGCCTGCGT CGAAACATCT GATTTCCGAA
GTGGCGATCA TTGCCGGTAT CGCCAAAGCG ACGCTTGCGC CCAATCCCAA GGTGGACTGG
GACAGCTATG TGGGCGACTA CTCAAGGATT CGCGACAAGA TCGAAGAAGT ACTGCCCGAG
CAGTTTTATG ACTTCAATCA GCGCATCCTC GAACCCGGAG GTTTCCGCTT GCCCAATGCC
GCCAGTGAGC GCAAGTGGGA CACCGAGTCG GGCAAGGCCA ACTTCCTCTT TCCCGAAGGT
ATCTACGACG AAGACGACAC GCCGCCGGGC GCCGAGCATC TGCAGTTGAT GACGATCCGT
AGCCATGACC AGTTCAACAC CACGGTGTAT TCCAACGATG ACCGCTATCG GGACATCTTT
GGCGACCGCA TGGTGGTGAT GCTCAACCCG CAGGACATCG AACGCCTGGG GCTGAAGGCC
GGGGACTACA TCGAGTTTCA GACGGCGCTC GACCCGACCA CCGCGCGGCG TGCAGCGGGT
TTCAAGGTCA TCCCCTACGA CGTGCCGCAG GGTTGCTGCG CCGCGTACTA CCCGGAGACC
AACGGCCTGC TACCACTGGC CAATCGGGAT AAACACGGCA ATACCCCTGC GGCCAAATCC
ATCCCGGTGA ACCTGGTGCG GATGAGTTCA GAGGGTACTC AGGTGGCGCT GGAGCGACGC
GGGTTGATTG CGGCGGCCAG TTGA
 
Protein sequence
MSESENSQAP LQGSQTDGTP AGGWAALSAV NKHLLHQHVL IKGNRTLMSM NKPGGFDCPS 
CSWPDPKKPH TFEYCENGAK ALAWESTKKR VTPEFFARHT VSELATWSDH ELEAEGRITE
PMRYDAATDK YLPVTWDEAF AEIGEELRNL SDPWKLELYT SGRTSNEAAF LYQLFGRMYG
MANFPDCSNM CHETTTAALP ESIGVGKGTT TLEDFESADA IFIIGQNPGT NSPRMMSELH
AAARRGASII SFNPLRERAL VRFAAPQDPR DMLSLHGVEI SSQYHQVRIG GDMIALQGVC
KAVIEADDVA QREHLPRVLD VAFIEEHTHG FEQYADYCRQ LPWDIIERHS GLTRQAIEEV
AAVYKRSKGV ICCWGMGITQ HKRGGDAMQQ IINLLLLRGN IGKLGAGACP VRGHSNVQGD
RTMGIYEKAG EPFLASMSKV FGFEASRKKG HAVAETCEAL LRGEVEALIS MGGNFFRAIP
DTDVICPTVS RLKMTVLVNT KLNRSATVHG QKAFLLPCVA RSERDLQNGV AQTITVEDSM
SMVHGSTGML EPASKHLISE VAIIAGIAKA TLAPNPKVDW DSYVGDYSRI RDKIEEVLPE
QFYDFNQRIL EPGGFRLPNA ASERKWDTES GKANFLFPEG IYDEDDTPPG AEHLQLMTIR
SHDQFNTTVY SNDDRYRDIF GDRMVVMLNP QDIERLGLKA GDYIEFQTAL DPTTARRAAG
FKVIPYDVPQ GCCAAYYPET NGLLPLANRD KHGNTPAAKS IPVNLVRMSS EGTQVALERR
GLIAAAS