Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0015 |
Symbol | |
ID | 3365490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 16812 |
End bp | 19175 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650358 |
Product | oxidoreductase alpha (molybdopterin) subunit |
Protein accession | YP_233127 |
Protein GI | 66043286 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.701694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT CGGAAAACTC CCAGGCCCCG CTTCAGGGAT CACAGACCGA CGGCACGCCG GCAGGTGGCT GGGCCGCGCT CAGTGCGGTC AACAAGCACC TGTTGCACCA GCATGTGCTG ATCAAGGGCA ACCGCACGCT GATGTCCATG AACAAGCCTG GCGGCTTCGA CTGCCCCAGC TGCTCCTGGC CGGACCCGAA GAAGCCGCAC ACCTTTGAAT ACTGCGAGAA CGGTGCCAAG GCCCTGGCCT GGGAATCGAC CAAGAAACGC GTGACTCCAG AGTTCTTCGC CCGGCATACG GTCAGCGAAC TGGCCACCTG GAGCGACCAC GAGCTGGAAG CAGAAGGCCG TATTACCGAG CCGATGCGCT ACGACGCCGC CACTGACAAA TACCTGCCCG TCACCTGGGA CGAGGCGTTC GCCGAGATCG GCGAAGAACT GCGCAACCTG AGCGACCCGT GGAAGCTGGA GCTGTACACC TCAGGGCGCA CATCGAACGA AGCCGCCTTT CTGTATCAGC TGTTTGGCCG GATGTACGGC ATGGCCAACT TCCCTGACTG CTCGAACATG TGCCATGAGA CCACCACCGC GGCGCTGCCC GAGTCGATCG GGGTCGGCAA AGGCACCACG ACGCTGGAGG ATTTCGAGAG CGCCGACGCG ATTTTCATCA TCGGCCAGAA CCCCGGGACC AACAGCCCGC GCATGATGTC CGAGCTGCAC GCCGCCGCGC GCCGGGGCGC GAGCATCATC TCGTTCAACC CGCTGCGGGA GAGGGCGCTG GTACGTTTTG CGGCGCCGCA GGACCCGCGC GACATGCTCA GTCTGCATGG GGTGGAAATC AGCTCGCAGT ACCATCAGGT CAGGATCGGC GGCGACATGA TCGCCCTGCA AGGCGTTTGC AAGGCCGTGA TCGAAGCCGA CGACGTGGCG CAGCGTGAAC ACCTGCCACG TGTACTCGAT GTGGCGTTCA TTGAAGAACA CACCCATGGC TTCGAGCAGT ACGCCGATTA CTGCCGACAG TTGCCCTGGG ACATCATCGA GCGCCATTCG GGCCTGACGC GTCAGGCCAT CGAAGAGGTG GCGGCGGTCT ATAAGCGCTC GAAGGGGGTC ATCTGCTGCT GGGGAATGGG CATCACTCAG CACAAGCGCG GCGGTGACGC CATGCAGCAG ATCATCAACC TGCTGCTGTT ACGCGGCAAC ATCGGCAAGC TTGGTGCGGG GGCGTGTCCG GTGCGTGGGC ATTCCAACGT ACAGGGCGAC AGGACGATGG GCATCTACGA AAAGGCCGGC GAACCGTTTC TGGCCAGCAT GAGCAAGGTG TTCGGTTTCG AGGCGTCCAG AAAAAAAGGT CACGCTGTGG CCGAGACCTG CGAAGCCCTG TTGCGTGGCG AGGTGGAAGC GCTGATTTCC ATGGGCGGTA ATTTTTTCCG CGCCATTCCG GACACCGATG TGATCTGCCC GACCGTCAGC CGCCTGAAAA TGACGGTGCT GGTCAACACC AAGCTCAACC GCAGCGCGAC AGTCCATGGT CAGAAGGCCT TTCTGCTGCC GTGCGTGGCA CGTTCGGAGC GCGACCTGCA GAACGGTGTG GCGCAAACCA TTACGGTGGA GGACTCGATG TCGATGGTGC ACGGCTCGAC CGGCATGCTT GAGCCTGCGT CGAAACATCT GATTTCCGAA GTGGCGATCA TTGCCGGTAT CGCCAAAGCG ACGCTTGCGC CCAATCCCAA GGTGGACTGG GACAGCTATG TGGGCGACTA CTCAAGGATT CGCGACAAGA TCGAAGAAGT ACTGCCCGAG CAGTTTTATG ACTTCAATCA GCGCATCCTC GAACCCGGAG GTTTCCGCTT GCCCAATGCC GCCAGTGAGC GCAAGTGGGA CACCGAGTCG GGCAAGGCCA ACTTCCTCTT TCCCGAAGGT ATCTACGACG AAGACGACAC GCCGCCGGGC GCCGAGCATC TGCAGTTGAT GACGATCCGT AGCCATGACC AGTTCAACAC CACGGTGTAT TCCAACGATG ACCGCTATCG GGACATCTTT GGCGACCGCA TGGTGGTGAT GCTCAACCCG CAGGACATCG AACGCCTGGG GCTGAAGGCC GGGGACTACA TCGAGTTTCA GACGGCGCTC GACCCGACCA CCGCGCGGCG TGCAGCGGGT TTCAAGGTCA TCCCCTACGA CGTGCCGCAG GGTTGCTGCG CCGCGTACTA CCCGGAGACC AACGGCCTGC TACCACTGGC CAATCGGGAT AAACACGGCA ATACCCCTGC GGCCAAATCC ATCCCGGTGA ACCTGGTGCG GATGAGTTCA GAGGGTACTC AGGTGGCGCT GGAGCGACGC GGGTTGATTG CGGCGGCCAG TTGA
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Protein sequence | MSESENSQAP LQGSQTDGTP AGGWAALSAV NKHLLHQHVL IKGNRTLMSM NKPGGFDCPS CSWPDPKKPH TFEYCENGAK ALAWESTKKR VTPEFFARHT VSELATWSDH ELEAEGRITE PMRYDAATDK YLPVTWDEAF AEIGEELRNL SDPWKLELYT SGRTSNEAAF LYQLFGRMYG MANFPDCSNM CHETTTAALP ESIGVGKGTT TLEDFESADA IFIIGQNPGT NSPRMMSELH AAARRGASII SFNPLRERAL VRFAAPQDPR DMLSLHGVEI SSQYHQVRIG GDMIALQGVC KAVIEADDVA QREHLPRVLD VAFIEEHTHG FEQYADYCRQ LPWDIIERHS GLTRQAIEEV AAVYKRSKGV ICCWGMGITQ HKRGGDAMQQ IINLLLLRGN IGKLGAGACP VRGHSNVQGD RTMGIYEKAG EPFLASMSKV FGFEASRKKG HAVAETCEAL LRGEVEALIS MGGNFFRAIP DTDVICPTVS RLKMTVLVNT KLNRSATVHG QKAFLLPCVA RSERDLQNGV AQTITVEDSM SMVHGSTGML EPASKHLISE VAIIAGIAKA TLAPNPKVDW DSYVGDYSRI RDKIEEVLPE QFYDFNQRIL EPGGFRLPNA ASERKWDTES GKANFLFPEG IYDEDDTPPG AEHLQLMTIR SHDQFNTTVY SNDDRYRDIF GDRMVVMLNP QDIERLGLKA GDYIEFQTAL DPTTARRAAG FKVIPYDVPQ GCCAAYYPET NGLLPLANRD KHGNTPAAKS IPVNLVRMSS EGTQVALERR GLIAAAS
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