Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0010 |
Symbol | |
ID | 3365485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 11361 |
End bp | 11903 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637650353 |
Product | D,D-heptose 1,7-bisphosphate phosphatase |
Protein accession | YP_233122 |
Protein GI | 66043281 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase [TIGR01656] histidinol-phosphate phosphatase family domain [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.456354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTGC TGATACTCGA TCGGGATGGC GTGATCAATC ATGACTCCGA CACTTACATA AAGTCGGTGG CGGAGTGGCT GCCCATTCCT GGCTCGATCG AAGCTATCGC AGCGCTGAGC AAGGCCGGCT GGACGGTGGC CGTCGCCACC AACCAGTCGG GCATTGCCCG AGGTTATTAC GATCTGGCCA CTCTGGATGC CATGCACGTG CGCTTGCGCA AGCTGGTGGC AGAGCAGGGC GGCGAGCTCG GTTTGATCGT CTATTGCCCG CATGGGCCAG ACGATGGCTG TACCTGCCGC AAGCCCAAAC CCGGCATGCT GCGGGCCATC GCCCGTCATT ACGCCGCGGA CCTCAAGGGT CTTTGGTTCG TGGGCGACAG CAAGGGTGAC CTGCAGGCCG CATTGGCCGT CGATTCTCAG CCTGTGCTGG TAATGACCGG CAAAGGCCGC AAGACGATGG AAGGCGGAGT GCCGGCAGGC ACATTGATTT TTGACGATCT GGCGGCAGTT GCCGCAGAAC TTATCCACAA CAGCACTCAC TGA
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Protein sequence | MKLLILDRDG VINHDSDTYI KSVAEWLPIP GSIEAIAALS KAGWTVAVAT NQSGIARGYY DLATLDAMHV RLRKLVAEQG GELGLIVYCP HGPDDGCTCR KPKPGMLRAI ARHYAADLKG LWFVGDSKGD LQAALAVDSQ PVLVMTGKGR KTMEGGVPAG TLIFDDLAAV AAELIHNSTH
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