Gene Psyr_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0002 
Symbol 
ID3365477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1575 
End bp2678 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content58% 
IMG OID637650345 
ProductDNA polymerase III subunit beta 
Protein accessionYP_233114 
Protein GI66043273 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA CCATTCAACG CGAAGCCCTG TTGAAACCCC TGCAATTGGT CGCCGGCGTC 
GTCGAACGCC GCCAGACCTT GCCGGTTCTT TCCAATGTGC TCCTGGTCGT CGAAGGTCAG
CAACTGTCGC TGACCGGTAC GGATCTGGAA GTCGAACTGG TTGGCCGCGT CCAGCTGGAA
GAGCCCGCCG AACCTGGAGA AATCACGGTT CCTGCGCGCA AGCTCATGGA CATTTGCAAA
AGCCTGTCCA ATGACGCGCT GATCGACATC AAGCTCGATG ACTCGAAACT GATCGTCAAG
GCCGGTCGTA GCCGGTTCAC CCTGTCGACT CTGCCTGCCA ATGATTTCCC TACCGTTGAA
GAAGGCCCGG GTTCGCTGAC GTTCACTCTG GTGCAGAGCA AACTGCGCCG CTTGATCGAG
CGCACCAGCT TTGCGATGGC CCAGCAGGAC GTTCGGTACT ACCTCAACGG CATGCTGCTT
GAAGTGAGTG CCGGTATCTT GCGTGCGGTT GCCACCGACG GCCACCGCCT GGCCATGTGC
TCGATGTCTG CCGATATCGA ACACGCCGAT CGCCATCAGG TGATCGTTCC ACGCAAAGGT
ATTCTTGAAA TGGCGCGCCT GCTGACCGAA CAGGACGGCA CGGTCAGTAT CGTTCTGGGT
CAGCATCACA TCCGTGCGAC GACTGGCGAA TTCACCTTCA CCTCCAAACT GGTCGATGGC
AAGTTCCCGG ATTACGAGCG TGTGCTGCCC AAAGGTGGTG ACAAGCTGGT GCTCGGTGAT
CGTCAGGCAC TGCGTGAGGC GTTCAGCCGC ACGGCGATTC TGTCCAACGA GAAGTACCGC
GGCATCCGTC TGCAACTGGC CAGCGGTCAA TTGAAGATTC AGGCCAACAA CCCTGAGCAG
GAAGAAGCAG AAGAGGAAAT CAGCGTCGAG TACAACGGTG ACTCGTTGGA GATTGGTTTC
AACGTGAGCT ACTTGCTCGA CGTGCTGGGC GTCATGACCA CCGAACAGGT GCGCCTGATT
CTGTCCGACT CCAATAGCAG CGCCCTGGTG CAAGAGTCCG ATAACGACGA CTCCGCCTAC
GTTGTCATGC CGATGCGTCT GTAA
 
Protein sequence
MHFTIQREAL LKPLQLVAGV VERRQTLPVL SNVLLVVEGQ QLSLTGTDLE VELVGRVQLE 
EPAEPGEITV PARKLMDICK SLSNDALIDI KLDDSKLIVK AGRSRFTLST LPANDFPTVE
EGPGSLTFTL VQSKLRRLIE RTSFAMAQQD VRYYLNGMLL EVSAGILRAV ATDGHRLAMC
SMSADIEHAD RHQVIVPRKG ILEMARLLTE QDGTVSIVLG QHHIRATTGE FTFTSKLVDG
KFPDYERVLP KGGDKLVLGD RQALREAFSR TAILSNEKYR GIRLQLASGQ LKIQANNPEQ
EEAEEEISVE YNGDSLEIGF NVSYLLDVLG VMTTEQVRLI LSDSNSSALV QESDNDDSAY
VVMPMRL