| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI02410 |
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| Symbol | |
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| ID | 3259805 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | - |
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| Start bp | 662891 |
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| End bp | 664534 |
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| Gene Length | 1644 bp |
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| Protein Length | 328 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 638258731 |
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| Product | Short chain 3-hydroxyacyl-CoA dehydrogenase, putative |
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| Protein accession | XP_572875 |
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| Protein GI | 58271438 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00642638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACAC CTGTGCTCCG AAGTGCAATG TCTTCTCAGC GCGCAGCTAC CTACAGACTC
TCAACCGTCC AGCGGCATCT CTCCACCACT TCAGCTACTC GCAAAGTTGA GGAGCTCACG
GTCTTTGGTG CCGGGCTTAT GGGTGCTGGA ATTGCCCAAG TTGGAGCCCA GAATGGTCTT
AAAGTGGGTA TTCGAGCCTG CTTCAGAGCT ATTCGTGGTT GACCTGTGGT TGTAGGTGGT
ACTTGCAGAT GTAACGGACA AGGCCCTTGA GTGGGTTCAC CCTTGCAAAT GTTGGTAGAA
TTAACTGATG ACCCAGCTAT ATTAAGAAAT GGTATCAATA TTATCTCTAA ATCCCTGGCA
AGAGTGGCCA AGAAGAAATC CCCAGACGAT ATAGAAGGCT TTACCAACAA TGTCTTAAAG
AATATCTCTA CTACAACCGA CTCGTGAGTA CATGGTCTCG AATTGATAAA CTGACGAATT
GCTCTACAAA GGTCTCAAGC TGTTGAGAAC GCTGACCTGG TAGTTGAGGC TATTATAGAA
TCTATCAAAG TCAAGAGGGA CCTCTTTGGC TTCTTGGACG GAAAGGCCAA GTGAGTGGCT
GATTCGATTA CGAGTCTGTT CATAAGACTA ACGAATGTAG ATCTGACTGT ATCTTTGCTA
CCAACACTTC TTCATTGTCT GTAACAGAAA TCGCGGAAGC GTGTAGCCCA GAGCGTCAAG
CCAAGTCAGT GGAAGGCTCC TGAGACTTTA TTGTTTGTTT GCTGATCAGA TTTCAGGTTC
GCTGGATTGC ATTTCTTTAA TCCCGTCCCT GGTAAGTCTT ATGGGCTCAC AATAATGAGT
AGCATTAATA GCTTGATCAG CTATGAAGCT CGTTGAAATC ATTCGAACAC CCCAGACCTC
GCAGGAGACA TATGAAACTC TTCGAGAAGT GACCCTTCAG ATGGGCAAGT CACCAGTCAC
GTGCAATGAT ACTCCAGGCT TCATCGTGAA TCGTCTTCTC GTTCCTTACC TTTGTATGTC
AACATATTCA ACCTGTACTT GCCCGAGAGC TAATGAAATA ATTTGTAGTG GAGGCCATTC
GAATGATTGA GCGAGGTGAT GCTACTGCGG AGGATATCGA CACCGCTATG GAACTGGGTG
CTGGATACCG TGAGTTTAAC AAGTCAATTT GGACGCTGTC CATGAACTAC TACTGTAGCT
AACGAATGAT TGGCCATAGC CATGGGAGTG AGCGTATCGT CTTATATTGT ACCTTACCTT
GACACTAATT GGTTTCTTTC AAGCCATTCA AGTTGCTCGA CTTTGTCGGA CTCGGTAAGT
CTTCAAACTC TTCTGTCCAT TCTTAGGCTA ATGATGAACA TGCTTCATAG ATACCACCTC
GTATATTGCC GAAGGATGGC GAGAGAAGGC GGCGTCTGGT GCGATCTCCA AGGAGTTGGT
TTCGCCCATT CCTCTTTTGG ACAAGCTTGT CAAGGAGGGC AAGCTGGGCA GGAAGAGTGG
TCATGGATTT TACAAAGTAA GGTTTGACAG GTAAGATTCG ACCTCTCAGC TAATGATCAT
GACAGTATGA GGGTAAGAAG TAAAACACAA ATTGTTGCGA ATACGCTTCG AAAATCGAAT
GTATCGAATG TCTACATGAG TAAT
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| Protein sequence | MITPVLRSAM SSQRAATYRL STVQRHLSTT SATRKVEELT VFGAGLMGAG IAQVGAQNGL
KVELTDDPAI LRNGINIISK SLARVAKKKS PDDIEGFTNN VLKNISTTTD SSQAVENADL
VVEAIIESIK VKRDLFGFLD GKAKSDCIFA TNTSSLSVTE IAEACSPERQ AKFAGLHFFN
PVPAMKLVEI IRTPQTSQET YETLREVTLQ MGKSPVTCND TPGFIVNRLL VPYLLEAIRM
IERGDATAED IDTAMELGAG YPMGPFKLLD FVGLDTTSYI AEGWREKAAS GAISKELVSP
IPLLDKLVKE GKLGRKSGHG FYKYEGKK
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