Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI00420 |
Symbol | |
ID | 3259518 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 102727 |
End bp | 106830 |
Gene Length | 4104 bp |
Protein Length | 1129 aa |
Translation table | |
GC content | 48% |
IMG OID | 638258526 |
Product | DNA-directed RNA polymerase, putative |
Protein accession | XP_572718 |
Protein GI | 58271124 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGCCCCTGTC AAGCGCACGG CGGCTTCATC CTCCACTACT GCTCCTCGAA AAGCTCCTCG CGCTGGCCCA TCTACGACAA CAGCAACCGC AAAGCGGCCC GCCACAACTT CCTCAACAGT AGCTAAGGGC AAAGCGCCAG CTCGACCGTC GGCATCTACA CAGGTCGATG TTAAGCCCAA AATTGAAGAT ACTAGGGGAG AGGAGGAATG GGCAGATTTA ATGAAGCAGC AGTATGGCGA TAAGAAGGGC GCTGATTGGT ATTCCAAGGG TGTGAAGACT GTCGAAGCAA GTATTCTCCC TGAATGATAT AGACTTGAAC TGATACTGTT GCAGGATAAA TGGCAACTTC TCCCAGCTTT TCTCAAAGTA AAAGGCCTTG TCAAGCAGCA TCTTGACTCC TTTAACTATT TTGTCAATGT CGACATCAAA GCTATTCTTG CGGCCAACTC TCTTGTCATT TCAGATATCA ACCCCAAGTA CTACATCCGA TATACCGACA TCCGTGTAGG GCGTCCAGCA CGACATGATG CTAATCAAGT GGCCTCTGCT CTTTCGCCGA TGGAGTGTCG ATTGACAGAT TCCACATATA GCGCGCCGAT CTATGTGGAT GTGGAATACA TGGGAGAAGA AAAGAGGAGC AAGCAGAGGG GTGTGCAGAT TGGCATGTTG CCAGTAATGT TGAGGAGCGA TTTGTGTAAC CTCAAAGGGA AGAATGAGGC GGAGCTAGCG AGGATGGGAG AGTGCCCGAT GGATCCGGGA GGATATTTCG TTGTTAAGGG AACGGAAAAG GTCATATTGG TGCAAGAGCA GTTGAGCAAG AATCGTATCT TGGTAATGAA GGATAAGAAG GATGAGGTGA TGGCTGAAGT TACATCGTGA GTCATTCATT CTTCGTATCT CTATCGCCAT GGTCAGAAGC TTCAACCAGA CTGGGATTTT GGTCGGATTG GTCGAGCCAG TTCAGTCTTT TTGAATTGCG GCCAGTCCCC TGATCAAAAC GAATTTGTTC GCGCCGAACC AGTTGGAGGC TTGGTTTTTA AAACCACGCT AATTCGCTTT GGGACACAAT GGCTCGTTGT AATGCTGATC ATGCACAGTT CAACGCACGA CCGAGTTGTC AAAACCTATG TCGTCAGTAA AGCCAACCGT CTCTATCTCC GGCACAACTC TTTCAAGGAA TTCATCCCTA TCGTTATCGC CCTCAAGGCT ATGGGTCTCA CTGCAGACAA GGAAATCCTC CAACTCATAT GCGGTTCCGA CGAACGATAC CAGGAGGCCT TTGGTGTTTC CCTCGAAGAA GCTGCCAAGG AGAAGACCTT TACGCGCCGT CAAGCGCTCG AATGGATTGG CGCCAGAGTA TCTCCCAACC AGGCTAAGGA TGACAGCGGG TCCAACCAGA AGCTTACCCC AAGCGATATT GCCCAGCAGG CTCTTGCTGC AATGGTTCTT GGTCATGTTC CTGTGCGAAA CATGAACTTC CGACCCAAGT GCATCTATCT TGCCACCATG GCGCGAAGGG TTCTCATGGC CATGATTGAC GATCATATGG TTGATGATCG AGATTACGTT GGTAACAAGC GTCTAGAACT TGCCGGTCAG CTTTTGTCTT TGCTCTTTGA AGATTCTTTC AAGACTTTTA ACAGCGAGCT CAAAAAGCGA ATGGACAAAA TTCTGGAAAA GCCCAACCGT GCCGGTCCTT TCGATGCCGG GACTCTGATT CGTCAAGGTG GTGATCCCAT CACTCAGGCG TTTGTCCGTT CCATCTCCAC CGGCAACTGG TCGCTTAAGC GATTCCACGT CGAGCGGGCA GGTGTTACCC ATGTCTTGTC TCGTTTATCC TTCATTGCCG CATTGGGTAT GATGACTCGT ATCTCTTCTC AATTCGAAAA GACGCGTAAG GTCTCTGGTC CTCGTGCTCT TCAACCGAGT CAGTGGGGTA TGCTCTGTCC TTCCGATACG CCTGAAGGTG AAGCATGTGG TCTTGTGAAG AACTTGGCTC TTATGACCCA CATTACTACG GACGTACCTG AAACGCCCTT GGTCAAGATG GCGTTCATGC TTGGTGTTGA GGATATTTCC CTTGTTACCG GTAATGAACT CTACCGGCCC GGAGTGCATA TGGTGCAGGT GAATGGTACG CTCATCGGTG TGACCAACAT GGCGAAACGA TTTGTGAGAC AGTTTAGAAA GTTGAGGCGA GCTGGAAGGA TGTCTGAGTT TGTGTCAATC TTTATTAACC ATCACCACAA GATCATCTAC ATTGCAAGTG ATGGTGGACG AATTTGTCGA CCGATGATTA TTGTTGAAAA GGGAAGATCA CGAGTGACAA CGGAGCATGT GAGGCTTTTG AAAGAGGGCA AAGTCACTTT CGATCATTTC CTCCGAGCAG GCTTGGTGGA ATACCTAGAT GTCAACGAGG AGAATGACTC TTTCATCGCG TGTTACGAAA ATGAGATCGA AGAAGGAACA ACGCATCTCG AAATCGAACC ATTTACTATT CTCGGTGCTG TCGCCGGTTT GATTCCTTAC CCTCACCATA ACCAATCTCC TCGAAACACC TATCAATGTG CGATGGGTAA ACAAGCTATT GGCGCCATCG CATACAATCA GCTTAACCGA ATTGATACCT TGCTGTATCT CATGACATAC CCTCAACAGC CCATGGTCAA GACCAAAACG ATCGAGCTGA TCGGCTACAA CAAACTTCCC GCCGGGCAGA ATGCTACAGT CGCTGTCATG TCTTACTCTG GATACGATAT CGAAGATGCT TTGATTCTCA ATCGTGCCAG TGTAGACCGA GGTTTTGGTC GATGTCATGT TCTCAAGAAG GTGACAACGC CAATGCGAAC GTTCCATAAC GGTTCACATG AACGTACTGC TTATCCTGAT CCTCCTCCTC GACCCGACGC ATATACTTTT GTTGATAAGG CCGATGGCAT GACCGCTCCC GGTGCTACTA TCAACCAATA CGACGTGATG ATCCATCGAG AAACCCCTGT CGATACTCGT GGTGGTGGTG CGGACACCCA GCTGTACAAA CCAATGCCTG TCACCCACAA GACACCTGAA CCGATTTTGG TTGATAAGGT GATGCTAACA GAGGGCGAGG ATGGTGCGTT GATCAAAATC TTGACGAGGC AGACTCGAAG GCCAGAACTG GGTGACAAGT TCTCTTCGCG ACACGGTCAG AAGGGTGTTT GTGGTTTGAT CGTGCCCCAG GCAGATATGC CATTCAATGA TCAAGGTATT GTACCTGATA TCATCATGAA TCCTCATGGT TTCCCCTCTC GAATGTATGT ACTTCCTTTC TGTGGTTCAG AAGCAACGCT AACGACCATA TAGGACTGTC GGAAAAATGA TCGAGCTCCT TTCTGGTAAA GCCGGTGTCG TCGCTGGTAA ACTCCAATAT GGCACTGCAT TTGGTGGTTC CAAGGTCGTC GACATGTCGC AGATCCTTAT CGACAACGGT TTTTCGTATG GGGGTAAGGA TATGTTAACC AGTGGTATCA CCGGTCAGCC GATGGAAGCC TACGTCTACT TTGGACCTAT TTATTATCAG AAACTTAAGG TATGCCTCTT GCATCTCGCC CAAACCATCA GGGACTGACA AGAATGATGT AGCATATGGT CATGGACAAA ATGCATGCTC GACCTACTGG TCCACGAGCT AATCTTACTC GCCAGCCTAC TGAAGGTCGT TCGAAGGACG GTGGTCTCCG TCTAGGTGAA ATGGAGCGTG ATTGTTTAAT TGGTTATGGT GCCACTCAGC TTTTGTTGGA ACGTCTTATG ATCTCCTCCG ATGCGTTCGA GACTCAAGTA TGTGAGAGCT GTGGTATGTT GGGATACAAT AACTGGTGTC CCAAATGTAA GAGTGGTAAG GGGGTTGTAG GGTTGACCAT TCCGTATGCG GCCAAGTTGT TGATACAGGA GGTAAGTTTT CGTTTTCCTA GTAAATGACA CGATGAAAAC TGACAAACGA AACAGCTGAT GGGTATGAAC ATTATGCCCA AGCTTTGCTT GGAAGACACT GTCTAGAGGT GAATTTAGGA AGGACGAGCA GTTTTCATGA ATCTACGGTT TATATTATGC ATGACATTAT GTTT
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Protein sequence | MKQQYGDKKG ADWYSKGVKT VEDKWQLLPA FLKVKGLVKQ HLDSFNYFVN VDIKAILAAN SLVISDINPK YYIRYTDIRV GRPARHDANQ VASALSPMEC RLTDSTYSAP IYVDVEYMGE EKRSKQRGVQ IGMLPVMLRS DLCNLKGKNE AELARMGECP MDPGGYFVVK GTEKVILVQE QLSKNRILVM KDKKDEVMAE VTSSTHDRVV KTYVVSKANR LYLRHNSFKE FIPIVIALKA MGLTADKEIL QLICGSDERY QEAFGVSLEE AAKEKTFTRR QALEWIGARV SPNQAKDDSG SNQKLTPSDI AQQALAAMVL GHVPVRNMNF RPKCIYLATM ARRVLMAMID DHMVDDRDYV GNKRLELAGQ LLSLLFEDSF KTFNSELKKR MDKILEKPNR AGPFDAGTLI RQGGDPITQA FVRSISTGNW SLKRFHVERA GVTHVLSRLS FIAALGMMTR ISSQFEKTRK VSGPRALQPS QWGMLCPSDT PEGEACGLVK NLALMTHITT DVPETPLVKM AFMLGVEDIS LVTGNELYRP GVHMVQVNGT LIGVTNMAKR FVRQFRKLRR AGRMSEFVSI FINHHHKIIY IASDGGRICR PMIIVEKGRS RVTTEHVRLL KEGKVTFDHF LRAGLVEYLD VNEENDSFIA CYENEIEEGT THLEIEPFTI LGAVAGLIPY PHHNQSPRNT YQCAMGKQAI GAIAYNQLNR IDTLLYLMTY PQQPMVKTKT IELIGYNKLP AGQNATVAVM SYSGYDIEDA LILNRASVDR GFGRCHVLKK VTTPMRTFHN GSHERTAYPD PPPRPDAYTF VDKADGMTAP GATINQYDVM IHRETPVDTR GGGADTQLYK PMPVTHKTPE PILVDKVMLT EGEDGALIKI LTRQTRRPEL GDKFSSRHGQ KGVCGLIVPQ ADMPFNDQGI VPDIIMNPHG FPSRMTVGKM IELLSGKAGV VAGKLQYGTA FGGSKVVDMS QILIDNGFSY GGKDMLTSGI TGQPMEAYVY FGPIYYQKLK HMVMDKMHAR PTGPRANLTR QPTEGRSKDG GLRLGEMERD CLIGYGATQL LLERLMISSD AFETQVCESC GMLGYNNWCP KCKSGKGVVG LTIPYAAKLL IQELMGMNIM PKLCLEDTV
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