Gene CNI00130 details

Gene Information

• Locus tag: CNI00130
• ID: 3259609
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: +
• Start bp: 38022
• End bp: 40316
• Gene Length: 2295 bp
• Protein Length: 455 aa
• GC content: 53%
• IMG OID: 638258497
• Product: polyadenylation factor 64 kDa subunit, putative
• Protein accession: XP_572946
• Protein GI: 58271580
• COG category: [R] General function prediction only
• COG ID: [COG0724] RNA-binding proteins (RRM domain)

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.232022
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACAAAAACCA CGAATCCGTC CGACATCCAC GTGCCATGCC CCCCAACGCC TCCAAGACAG 
TCTTTGGTGA GTATCCCATC TCCCATACTC GTGCATGTTC TCTGACCTGC TCTGGCAGTC 
GCAAATATCC CATAGCAAGT TCTCTTCAGC TCTCTGTATA CAAAGCGCTA ACCGTAGCTT 
TCGACATCTT CTCTCTACCC TTTACCCGCT CATAACACTT GTACGGAAAC TATACTGTGG 
CGTGGATCAA CAGCGATGTA TCCGAAGAAC AGCTTGCCAA CGTCTTTTCA GAGGCTGGGC 
CTGTAGCCAA CGTCGAGTAT GTCTCACTTC CTTTCCTTTC ATCCATTCTT ATCCCTTCGA 
AAATGAACGG CGCTGACTTG GCTGGATAGA ATCAAGTTTG ATGCCAACAC TGGTAGATCA 
AAAGGTTATG CTTTCGTGCA ATTCTATGGT CAGTAGTGTT CGTCATACAC CGTGTGTGGC 
TAAAGCTAAA TGCTTTCCCT GTCTATCCCG ACGCTCAACT ATGCTCGCCC CTCATGAAAT 
CTTCCCCTCT GTATCCCCTT GGATTGATTG GATTATACGA TCTAAATAAA CAACACAACG 
ATCTCATCCG TCCCATCTTC GTTCCATAAA CCCAACTCTT TTCTTCTACT CTCAATAACC 
GCTACACACG CCCTCATCAC AAACAGACGA AGCAACTGCC CTCTCCGCTG TGCGCAACCT 
CCAAGACGCA CCCGTAAATG GGCGAAACCT CCGTGTAGAA CTTTCAACCG ATGAACCTGG 
TCCCCGTCGG CGCGGTCCTG GTCCTGGTGC TGTAGGTGTG GGTGCTGCTC CTGGAGCCGG 
TGGACCCGGA GTCGGTGGAC CCTCTGCATC CCTCGGTGGT CCTCGGCCCA TGGTCCCAGC 
ACCAGGTCCA GGTGGTGCTC CTCCCTTCAC CAGCACCGGC GCCGGCGCAC CCGGTTATCC 
TCCCCGAGCA CCATTCGACC CCCGTTATCC CCAAGCCCAC TCTCAGTCAC ACGAGAACAC 
CCCTCCTCCC GCCGGTGTCG GCGCTAGAAG ACAAGGCGGG GATGATATCG ATTTGAGGAT 
GGCGCCTCAG GGTATAGACT TGCTTCCAGG ACAAAAGGCG GTGGATACGA TAAGCAAAAC 
TTTGGCGGGG ATTGCGCCCG GTCAAATGGG GGATGTTATG ACCAGTATGA AGGTGCGCCA 
AAATCATCCT TTCCCACTTT CCTTCAACTG CCAAGAAAAA AAAAGAACAA AAGCTGACCT 
TTGAACGAAA TAAAAAATAA AAAAATAGTC GCTTATCCAA ACAAACCCTG ACCAAGCCCG 
CCAACTCTTG AGCCAACAGC CCCAACTCGC ATACGCCCTC TTCCAAGCTA TGCTTCTTCT 
CAACCTTGTC GACCCTTCTG TTCTGTCTAG TATCCAGCCT TTGGCAGCTT CCGCTTCTGC 
AGCTGCTTCT GGTGGGGCTG CGTCTGTAGC CCCCGGTCCT GGTGGTGCAG GTGCAAGAGC 
ACCCAACTAC CCACCGTACC CCCCTCCGAC CCAAACCCAA GGTCCACCTG GCGGCCAACA 
AGCCTTCCGT CCTCCGCCCC AAGCCCTCTA TGGAGGCGCA CCCCCTCTTC CCAACCAAAA 
CCAAAATCAG AACCAAAACC AAAACCCTCC TTACCCACCC TATCCCTCTG GTCCCGGCGT 
CCCCGGGGGT GTGTCTGGTG CCGGTGCCGG CATACCACCT CCCACTTCTA CACCCGTACC 
TCCCACCCCG CATCCCGCTC ACGCCGTCCC AGTTGGTCCA CCCGGTGGAC CCGCACCACC 
AGCCCCAGGA TTGGCATCCC TCCCCCCTGC GGCGCAAGCC GCACTCTCCA CACTCCCTCC 
TGACCAACAA CAGATGCTTC TCCAGGTTTT ACAGCTCTCG CCAGCGCAGA TTGCGGCGTT 
GGATCCGACG CAAAAGGCTT CAGTCATGCA ACTCGTGAGT GTTCCCTTCC CTCTCTCTCT 
TTCGTTCACC TTTTCCTTTT TTGCTGTTAC CTCCCCTGCC TCTCCGTCTC TTGGCATTGA 
TTAATAGAAA CTGATGAAAT TTGTTTTTGG ACCCGTTTAG CGACAACAAT TCCTCGGGAC 
TGCTTAGACA TAAAAGAAAG AAAAAAAGCA GAGATACTTG TCCCAAAAAT GCATGTGTGT 
GCGTGAGTGG GTCGGGAGAG AAATATGGCA GGAAGATAGT GAGGAGAAGG AAAGTTCCAG 
AAGAATGGGA ATGATACAAG TTAGACACAA CAACGAGAGT GGGGGGACCA CGACATATAG 
CGCAAAGGAG CAAAA 

 

Protein sequence

MPPNASKTVF VANIPYDVSE EQLANVFSEA GPVANVEIKF DANTGRSKGY AFVQFYDEAT 
ALSAVRNLQD APVNGRNLRV ELSTDEPGPR RRGPGPGAVG VGAAPGAGGP GVGGPSASLG 
GPRPMVPAPG PGGAPPFTST GAGAPGYPPR APFDPRYPQA HSQSHENTPP PAGVGARRQG 
GDDIDLRMAP QGIDLLPGQK AVDTISKTLA GIAPGQMGDV MTSMKSLIQT NPDQARQLLS 
QQPQLAYALF QAMLLLNLVD PSVLSSIQPL AASASAAASG GAASVAPGPG GAGARAPNYP 
PYPPPTQTQG PPGGQQAFRP PPQALYGGAP PLPNQNQNQN QNQNPPYPPY PSGPGVPGGV 
SGAGAGIPPP TSTPVPPTPH PAHAVPVGPP GGPAPPAPGL ASLPPAAQAA LSTLPPDQQQ 
MLLQVLQLSP AQIAALDPTQ KASVMQLRQQ FLGTA