| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH03770 |
|---|
| Symbol | |
|---|
| ID | 3259046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | + |
|---|
| Start bp | 29944 |
|---|
| End bp | 32611 |
|---|
| Gene Length | 2668 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638258107 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_572537 |
|---|
| Protein GI | 58270762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000218596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGGAGTGCTT CTATAAGATA CTAAATTTGA ACATGAGACG GTAAAGAACA AGTATGGCAG
ACAAAGAAGA ACTACAAGAA CGAACTAAAG TGGCTAGACA AGAGTATAGA GAATATCTAC
CGCTTGCACA GCAACTCCAA GGAGATCTCC GAGACGACGC CGAACAACTT CGGGTACAGG
AAGGCTGGGA TGAAGATACG TGGAATGGTG TTGAAGAGTG GGTTGATGAT GTGGGAAGTA
TATGGAGAGC TTTAAGAGTA AGTCTTAGTT TGATTTCGTA TCATCTAAGC TTGACTAATG
CGACATTGCA GAGAAACCGC TATGACCAAA ACAAGACACA CTCATTCCTC CTCTCAGTCC
TGTCGACTCG TCTTTCTCTC TCTTTACACG GCCCTATCCC TTCTATCCTA CCATACTCGG
ATTCCCCTCT CTTCCACATC CTCCCCCTCC CTTCACACAC CGATAAACTC AACAGACCAA
TTGTCGTTCT CACCGCGCGC GAAATTGTTA GGGACGAACA AGGAATGCTA GATGATGTCA
AAGAATGGAT ATGGTGGGCT TTAGAAATGT GTAGGAGGAC ATCTAAGGAC TGGTGGAGTA
AAGGGATGTG GGACGGAAGT GGGGTGGATG GGTATGGGAG GGGAAAAGGG AAGGCGAGGG
GCGAAGGAGG GGAAGGGATT GTCTTGTTGG TTGATGCAGC CGGTGCGGGA TATCGAAACC
TTGTAAGTGC AATAAAAGTC ACGTATCCAT TCATGCCAGG GGCATTATAA ATTGAAGCAA
TTGCCTGTTT CTAGGAGGTT GATCTACTGC CTACACTACT TTCCGTAGGA CATAACAGCT
TTCCGGGCCT CCTCGAGGCG GTATACGTTA TCAACGTTGG ATGGACAGGG CGAAGCATGT
GGGCCGTTGT CAAGCATTTG CTCCCCAAAT CTGCTTTAGA AAGGGTTGCA TTCCTGGACA
CGAAAGAATC ACTAGCCGAA GTCTTCGAAC TGGACAAGAT CCCACAAGGT ATGTGCATAG
CAGTGTCCCT TGTAATTGTG TGATCTTCAA TAACGCTGTA CACAGCATAC GGTGGCGACA
GCCCTTATAC ATTCTCGCCC TCTAATAATC CCATTTACGC ATACTATTCC CGCCACTCGA
GTCATTCGTT TATTGCCTCC ATTTCCAGAA GCACATCATG CACCTCTATA GCAGACGTAT
ACTACACAGC GCGCAACACG CCTTTTCCGA GCCGCCGAAC GTCTCCATTG ATTAGTAGGC
AGAATAGCGC TTCAAGTGGT ATGATGAAAG CCATGTTTCG AGCGGGGTAT GGAAATGATT
TGAGAATGAC CAAGAGTCGT GATGAGAGAT CCCGAAAGGT GGAGGGAGAT GATGATGGCG
ATGAAGAGGA TGAGATGACC AGAGTCATAT CTGCATCTGA TGTTGCCGCC GTAGGCCCGA
TGACGGGTCT TATAACACAG TCCTTGACCG AACCGGAAGA TCCACAACCG ATTTTATCCA
GGGCAAGTAG TACCCTCACG TCAAGAAGTA AACCACCTAC TCGAGCTCCC TCGTCCGCAG
CGGTCTCACG CATCAAATCC CTCTCCGACT TTCATCTCTA TCTCTCACCT TCTCGATTAG
CGCGTATCGA TCTTCTCTCT GACTCTTCTG ATTCGGAAGA TGAGCCTCCC CCTCCACCTT
CTATCCCTTC GCTTCCTCGT CGCAAAGTGC TTCGCCCGGC GCTGCTGGAA AAGAGCCTAG
CAGGAACGCC TGACGAGCGC GAGAAAAGAA CTAATAGACC CGCTTTGCGG TTGATGGGCC
TTCCAGGTCA TTTGGCGGAT GATGATCCTG TGCGAAGCTA TTCGGGAAGA TTGCAGATGC
ATCATGCAAA GTGGCTGGAG GGATGGAAGG GAACTCCGGA AGAGCTTGGA CTGGAAGATA
ATCATAAGCT TGGCGGCGTA AAACATGAGG AAGAGGAAAA CGCCCCGATA CCGAGAACAA
TATCCGTTTC ACCACCTATT GATCGTCCTC CTTCACCTTC CGGCACTCTT GAGCCATCTC
CGTCACCGTC TCCCATCCAT TCTCCCGCAA TGACACCACA ACCTCATGAC ATCCAGCCTT
ACTCCACCTC AAATCCTTTC TTCGGTTATC CAGTAGTGCA ATTTGGCAGC TCTATCAGGC
CAAGATATCC TCGTAACAGG AAACGTGATC TTGTCAAGAC GCTCTTGTTC CTTTTCATGC
TAAAGTTACA GAGCTGGAGG GATTCTGTTG AAAGAGCTCT AGGCTTGAAC CGTCTACGTA
TCCCGTCCCT TTCCCAACCT TACTGCTCGT CCTCACTTTA TACTCCTGGG CCTAACAGGA
GAAACCCCGC CGAGGGTCTT GTTCGCTCTG CGGCAACGCC CGGCACGTAC TCGAAGCAAG
TCGCGAAATA TAGAAGATGG GATAAAGATT GGTGGTGGAT GATTATTGGG ATGCTGTTGT
TGAGAGGAAC GTGGGGAAGA ATTGTGCTGG CACCGTTGGA GGCATTGGGA CTGGGGTTGT
CTGAATGGAA GGCTATATGG GGAGCAGTAT GACACAAGAG CGGTGACACA AGAGCCGCGT
GGTGTGATGG AGAGCTCCGA TGTTTTGTTG TGGTAACTGC TGTTGGACCT TTCATATGTA
CTCGCCAGGT TGTATTCATT GTCGTCAT
|
|---|
| Protein sequence | MADKEELQER TKVARQEYRE YLPLAQQLQG DLRDDAEQLR VQEGWDEDTW NGVEEWVDDV
GSIWRALRRN RYDQNKTHSF LLSVLSTRLS LSLHGPIPSI LPYSDSPLFH ILPLPSHTDK
LNRPIVVLTA REIVRDEQGM LDDVKEWIWW ALEMCRRTSK DWWSKGMWDG SGVDGYGRGK
GKARGEGGEG IVLLVDAAGA GYRNLSRDER SRKVEGDDDG DEEDEMTRVI SASDVAAVGP
MTGLITQSLT EPEDPQPILS RASSTLTSRS KPPTRAPSSA AVSRIKSLSD FHLYLSPSRL
ARIDLLSDSS DSEDEPPPPP SIPSLPRRKV LRPALLEKSL AGTPDEREKR TNRPALRLMG
LPGHLADDDP VRSYSGRLQM HHAKWLEGWK GTPEELGLED NHKLGGVKHE EEENAPIPRT
ISVSPPIDRP PSPSGTLEPS PSPSPIHSPA MTPQPHDIQP YSTSNPFFGY PVVQFGSSIR
PRYPRNRKRD LVKTLLFLFM LKLQSWRDSV ERALGLNRLR IPSLSQPYCS SSLYTPGPNR
RNPAEGLVRS AATPGTYSKQ VAKYRRWDKD WWWMIIGMLL LRGTWGRIVL APLEALGLGL
SEWKAIWGAV
|
|---|
| |