Gene CNH03700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH03700 
Symbol 
ID3259079 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp48671 
End bp51401 
Gene Length2731 bp 
Protein Length557 aa 
Translation table 
GC content47% 
IMG OID638258113 
Productglutamate decarboxylase, putative 
Protein accessionXP_572532 
Protein GI58270752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID[TIGR01788] glutamate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCCCAGCA GTCTCGTAAA CGTGTGATAG CCTCTTACAA CGTCGGAAAG GGTTTTAATA 
CAAACACAGC AAACCGCGTA TTAAGTCTTC ATTTCAATCG CCTCCGTCAT CCTCTTCTCT
CTTGCTAGGA AAGATAGGTG AGCTATATAA AGCACAGATA ACATCGCAGA TTCAGTACCT
GACCGCACAG ACTTCCCAGA ACGAACATCA TGGCCCTCTC TCAACACGTA GACGCCGACA
AGCTCATTGA AGAGTGCAAA GACCACCCTA TCAAGAGGCA CCTTAGTCAT AAGTAGGTGT
ATCGGCCATG AACATAGCCA TTTCGTGACT AATTTCTGCG CAGGGCTGCT CTTTATGATA
TTCCCTACAC TTCCCGCTAC GAAGTTGAGG ACGAGGTTCC GAGATACAGG CTCCCCAGTA
AGGGTGTCAA TGGCAGGGCT ACATACCAGC TCTTACACGA TGAGCTGATG CTTGGTGAGT
TTTCATCATT ATTTTTTAGA GTTAAAGGCT GACTGGGAAC TAGATGGGAA CCCCAACATG
AATTTGGCTT CGTGAGTTTT TCGCACCATT TGCAAACGAT CTTGAGTCGG GGAATACTGA
TCAATGAGAT ATACAGATTT GTTCACACTT GGGTTCCTGA TGAGTGCAAC CGTCTTGTCC
AGGAAAACAT CAATAAGAAT CTGGTCGACC AGGACGAATA CCCTGCTGCT CAACAGATTC
ACGAGCGATG TATCGTAAGC TACAGCAGCC GCGACGAATG ACTCCAGCTG ACCCATGTGG
TCAGTCAATG CTCTCTCACC TCTGGCACGC TCCCAAAGAA GCCACGGCTA TGGGCACCGC
TACTACCGGT TCCTCTGAAG CCATCATGCT TGGCGGTCTC GCTCTCAAGC GCCGATGGCA
GGAAAAGATG AAAGCCGCTG GGAAAGATAT CCACAACCCC GGACCTAACA TCGTTATGGG
TGCAGAGGCT CAAGTAGCTT TGGAGAAGTT TGCTAGATAC TTTGAGGTTG AGGCGAGACT
TGTGCCTATT AAGCCTGAGG TGAGTAAACG CCACGAAAGA AGAATGAGTT AAAGGCTGTG
AGTTAAAGGC TGATGGAAGT AGTCGAGTTA TGTAATGGAC CCCAAGGACG TCCTCAAATA
CGTCGATGAG AACACAATTG GTGTCTTTGT GTAAGTTTTA ATTTTATTTT ATTTCCGGGT
ACACCAAGTT GACCTTTTAC AGTATCTTGG GATCAACTTA CACCGGCGCG TTTGAATCCG
TAAAAGACGT GGCTCAAGAG CTCGACAAAT ACGAGGCCGA GACAGGTATT AGTGTCCCTA
TCCACGTTGA TGCCGCTTCT GGTGGTTTTG TTGCGTAAGT TTAGAATGAC TCATACGGTC
GTTTCGAAAT TAACGGTTCT GGAAGTCCAT TTGCATACCC TCATTACCAG TGGGACTTCC
AAATTCCTCG AGTCCATAGG TGAGAAGCTG TTAAAAGAAG AGAAATAATT GCTGAAAAGC
GGGATAGTAT CAATGCCTCG GGTCACAAGT ACGGTATGAG CACTGTGGGT GTCGGATGGA
TCATCTGGAG GTCTATGGAG TACCTTCCTA AGGAGTTGAT CTTTGAGCTT CACTATCTCG
GTGCTGTAAA TAAAGTCCTA ATTTTTTATT TTAATCATTC TAACTCCGGT TCTGTAGACC
GATTATTCAT TTAATCTCAA TTTCAGTAGA CCGGCACACC CTATCCTCGC CCAGATGTTC
ACTTGTAAGT CCGGATGAAG GCGGGTGGAC CTTGCAGCTA ATTCTATCAT AGTCTTGAAC
CTCGGTTTCG AAGGTTACAA GCGTATAATG GACAAGAACC TCACCGTAGC TCGTCTCATC
TCCCGAGCCC TCGAGCACTC TGGCTACTTC ATTTGTCTCT CCAAGATCCA CCACCCCAAG
GCTCTTACCG AATCCTCCAG CAGCGCCGAA CAATCCAACA TCCTCCCTGC CGTCGCCGAC
GCCGCTAATA CCGTTTTGCA CGGCAAGAAG ACTACTGTTG ACGATGCCGA GTATTATTGC
GAGGGTTTGC CCGTTGTGTC GTTTATGTTT ACGGACGAAA TTAAGAAGAA GTACCCTGGT
GTGAAGCAGG CGTGGATCCA GATGCAGCTG AGGTCTATCG GCTGGATCGT CCCCAAGTAA
GTCCGGATTT TTTTGGGGCA ATTGTGGACC CAGTATTGAC TTGTCACAGC TACCCTCTCG
CTCCCGACTG CGAGAAAACT GAGATCCTCC GAGTCGTCGT CCGAGAGTCC CTTTCTGGTG
ACTTGGCGAG GAAGCTCATC CACGACATTC TTCAGGTGTA CGTCCTCATC GGTTTTCCTT
GTTTTAAAGT TCGTGCTGAT TTTTTCATGG CTTTACAGAA CCGAAGATCT CCTAAATGAC
GCTGGACCTT CATACTCCAT GTCTACTGCT ACCAGGCGTC ACGAGAATTT GGACCACGGC
AAGCTGGATA ATATTGATGC TGTCCACATC AAGGTGCGTA TCTGCCCTGT CGGCATTTTC
AGTCTCGCGG GTTAGTCACT AACATGATAT GATTTAGCAA CACACTTCCA CCTATTCTAA
GCCCTGTTAG AGAAACCTTG TTAGAGTATG TTAATGAAGA AGTAGTCCGG TGGATGGGAG
AAGATCTTGT ACAGAGAAAG CGTAACAAAT GACTTTTTAC TCGGCTTTTT GCGATTAGTC
TGGTTTGGAT ATGCAAAAAT TGGAGCGTTA T
 
Protein sequence
MALSQHVDAD KLIEECKDHP IKRHLSHKAA LYDIPYTSRY EVEDEVPRYR LPSKGVNGRA 
TYQLLHDELM LDGNPNMNLA SFVHTWVPDE CNRLVQENIN KNLVDQDEYP AAQQIHERCI
SMLSHLWHAP KEATAMGTAT TGSSEAIMLG GLALKRRWQE KMKAAGKDIH NPGPNIVMGA
EAQVALEKFA RYFEVEARLV PIKPESSYVM DPKDVLKYVD ENTIGVFVIL GSTYTGAFES
VKDVAQELDK YEAETGISVP IHVDAASGGF VAPFAYPHYQ WDFQIPRVHS INASGHKYGM
STVGVGWIIW RSMEYLPKEL IFELHYLGAT DYSFNLNFSR PAHPILAQMF TFLNLGFEGY
KRIMDKNLTV ARLISRALEH SGYFICLSKI HHPKALTESS SSAEQSNILP AVADAANTVL
HGKKTTVDDA EYYCEGLPVV SFMFTDEIKK KYPGVKQAWI QMQLRSIGWI VPNYPLAPDC
EKTEILRVVV RESLSGDLAR KLIHDILQVT EDLLNDAGPS YSMSTATRRH ENLDHGKLDN
IDAVHIKQHT STYSKPC