Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH03700 |
Symbol | |
ID | 3259079 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | + |
Start bp | 48671 |
End bp | 51401 |
Gene Length | 2731 bp |
Protein Length | 557 aa |
Translation table | |
GC content | 47% |
IMG OID | 638258113 |
Product | glutamate decarboxylase, putative |
Protein accession | XP_572532 |
Protein GI | 58270752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCCCAGCA GTCTCGTAAA CGTGTGATAG CCTCTTACAA CGTCGGAAAG GGTTTTAATA CAAACACAGC AAACCGCGTA TTAAGTCTTC ATTTCAATCG CCTCCGTCAT CCTCTTCTCT CTTGCTAGGA AAGATAGGTG AGCTATATAA AGCACAGATA ACATCGCAGA TTCAGTACCT GACCGCACAG ACTTCCCAGA ACGAACATCA TGGCCCTCTC TCAACACGTA GACGCCGACA AGCTCATTGA AGAGTGCAAA GACCACCCTA TCAAGAGGCA CCTTAGTCAT AAGTAGGTGT ATCGGCCATG AACATAGCCA TTTCGTGACT AATTTCTGCG CAGGGCTGCT CTTTATGATA TTCCCTACAC TTCCCGCTAC GAAGTTGAGG ACGAGGTTCC GAGATACAGG CTCCCCAGTA AGGGTGTCAA TGGCAGGGCT ACATACCAGC TCTTACACGA TGAGCTGATG CTTGGTGAGT TTTCATCATT ATTTTTTAGA GTTAAAGGCT GACTGGGAAC TAGATGGGAA CCCCAACATG AATTTGGCTT CGTGAGTTTT TCGCACCATT TGCAAACGAT CTTGAGTCGG GGAATACTGA TCAATGAGAT ATACAGATTT GTTCACACTT GGGTTCCTGA TGAGTGCAAC CGTCTTGTCC AGGAAAACAT CAATAAGAAT CTGGTCGACC AGGACGAATA CCCTGCTGCT CAACAGATTC ACGAGCGATG TATCGTAAGC TACAGCAGCC GCGACGAATG ACTCCAGCTG ACCCATGTGG TCAGTCAATG CTCTCTCACC TCTGGCACGC TCCCAAAGAA GCCACGGCTA TGGGCACCGC TACTACCGGT TCCTCTGAAG CCATCATGCT TGGCGGTCTC GCTCTCAAGC GCCGATGGCA GGAAAAGATG AAAGCCGCTG GGAAAGATAT CCACAACCCC GGACCTAACA TCGTTATGGG TGCAGAGGCT CAAGTAGCTT TGGAGAAGTT TGCTAGATAC TTTGAGGTTG AGGCGAGACT TGTGCCTATT AAGCCTGAGG TGAGTAAACG CCACGAAAGA AGAATGAGTT AAAGGCTGTG AGTTAAAGGC TGATGGAAGT AGTCGAGTTA TGTAATGGAC CCCAAGGACG TCCTCAAATA CGTCGATGAG AACACAATTG GTGTCTTTGT GTAAGTTTTA ATTTTATTTT ATTTCCGGGT ACACCAAGTT GACCTTTTAC AGTATCTTGG GATCAACTTA CACCGGCGCG TTTGAATCCG TAAAAGACGT GGCTCAAGAG CTCGACAAAT ACGAGGCCGA GACAGGTATT AGTGTCCCTA TCCACGTTGA TGCCGCTTCT GGTGGTTTTG TTGCGTAAGT TTAGAATGAC TCATACGGTC GTTTCGAAAT TAACGGTTCT GGAAGTCCAT TTGCATACCC TCATTACCAG TGGGACTTCC AAATTCCTCG AGTCCATAGG TGAGAAGCTG TTAAAAGAAG AGAAATAATT GCTGAAAAGC GGGATAGTAT CAATGCCTCG GGTCACAAGT ACGGTATGAG CACTGTGGGT GTCGGATGGA TCATCTGGAG GTCTATGGAG TACCTTCCTA AGGAGTTGAT CTTTGAGCTT CACTATCTCG GTGCTGTAAA TAAAGTCCTA ATTTTTTATT TTAATCATTC TAACTCCGGT TCTGTAGACC GATTATTCAT TTAATCTCAA TTTCAGTAGA CCGGCACACC CTATCCTCGC CCAGATGTTC ACTTGTAAGT CCGGATGAAG GCGGGTGGAC CTTGCAGCTA ATTCTATCAT AGTCTTGAAC CTCGGTTTCG AAGGTTACAA GCGTATAATG GACAAGAACC TCACCGTAGC TCGTCTCATC TCCCGAGCCC TCGAGCACTC TGGCTACTTC ATTTGTCTCT CCAAGATCCA CCACCCCAAG GCTCTTACCG AATCCTCCAG CAGCGCCGAA CAATCCAACA TCCTCCCTGC CGTCGCCGAC GCCGCTAATA CCGTTTTGCA CGGCAAGAAG ACTACTGTTG ACGATGCCGA GTATTATTGC GAGGGTTTGC CCGTTGTGTC GTTTATGTTT ACGGACGAAA TTAAGAAGAA GTACCCTGGT GTGAAGCAGG CGTGGATCCA GATGCAGCTG AGGTCTATCG GCTGGATCGT CCCCAAGTAA GTCCGGATTT TTTTGGGGCA ATTGTGGACC CAGTATTGAC TTGTCACAGC TACCCTCTCG CTCCCGACTG CGAGAAAACT GAGATCCTCC GAGTCGTCGT CCGAGAGTCC CTTTCTGGTG ACTTGGCGAG GAAGCTCATC CACGACATTC TTCAGGTGTA CGTCCTCATC GGTTTTCCTT GTTTTAAAGT TCGTGCTGAT TTTTTCATGG CTTTACAGAA CCGAAGATCT CCTAAATGAC GCTGGACCTT CATACTCCAT GTCTACTGCT ACCAGGCGTC ACGAGAATTT GGACCACGGC AAGCTGGATA ATATTGATGC TGTCCACATC AAGGTGCGTA TCTGCCCTGT CGGCATTTTC AGTCTCGCGG GTTAGTCACT AACATGATAT GATTTAGCAA CACACTTCCA CCTATTCTAA GCCCTGTTAG AGAAACCTTG TTAGAGTATG TTAATGAAGA AGTAGTCCGG TGGATGGGAG AAGATCTTGT ACAGAGAAAG CGTAACAAAT GACTTTTTAC TCGGCTTTTT GCGATTAGTC TGGTTTGGAT ATGCAAAAAT TGGAGCGTTA T
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Protein sequence | MALSQHVDAD KLIEECKDHP IKRHLSHKAA LYDIPYTSRY EVEDEVPRYR LPSKGVNGRA TYQLLHDELM LDGNPNMNLA SFVHTWVPDE CNRLVQENIN KNLVDQDEYP AAQQIHERCI SMLSHLWHAP KEATAMGTAT TGSSEAIMLG GLALKRRWQE KMKAAGKDIH NPGPNIVMGA EAQVALEKFA RYFEVEARLV PIKPESSYVM DPKDVLKYVD ENTIGVFVIL GSTYTGAFES VKDVAQELDK YEAETGISVP IHVDAASGGF VAPFAYPHYQ WDFQIPRVHS INASGHKYGM STVGVGWIIW RSMEYLPKEL IFELHYLGAT DYSFNLNFSR PAHPILAQMF TFLNLGFEGY KRIMDKNLTV ARLISRALEH SGYFICLSKI HHPKALTESS SSAEQSNILP AVADAANTVL HGKKTTVDDA EYYCEGLPVV SFMFTDEIKK KYPGVKQAWI QMQLRSIGWI VPNYPLAPDC EKTEILRVVV RESLSGDLAR KLIHDILQVT EDLLNDAGPS YSMSTATRRH ENLDHGKLDN IDAVHIKQHT STYSKPC
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