| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02400 |
|---|
| Symbol | |
|---|
| ID | 3259354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | + |
|---|
| Start bp | 449955 |
|---|
| End bp | 450679 |
|---|
| Gene Length | 725 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638258245 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_572415 |
|---|
| Protein GI | 58270518 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC ACCACCCCCG CGCACTTCCC ATCGTCCTTA TAACCGGCAC CCCAGGTACC
GGCAAGACTT TGCACTCCCA ACTCTTAGTA TCTGAGCTCT CGGAGGCCGA TTCGCCTATA
CCCATGAAAC ACCTCAACAT TGGAGATATC GTCAAGGAAC ACGGATTTCA TGAAGGATGG
GATGAGGAAT GGAAGTGCTG GATTGTTGAC GAAGAGAGAT TGTTAGATTG GATGGAGGAA
GTTGTGAATC CAAGAGATGG ACCGGCTGAG ACTGGTATGT TCAAAGTTTA TTTAGTGTTA
TACCCAGGGT GCGTTTTGTT AATAAACGAA CATGGTAATC TTACAGGGTT TGTTATTGAT
CACCATGATC CCTCGCTTTT CCCCGAGCGA TGGATTGACC TCGCGGTCGT TCTCACTTGC
GACAACGGTA TCCTGCATGA CCGCCTGACC GCACGGTGCG TACACGTCTC ATTTATGCTT
CATTGAATAT CGCTGAAATC TCGCTATGAA TATACAGTAA CTACCCTGCC AACAAGATTT
CCGAAAATAT TACCGCGGAG ATCATGATGA CTTGTCTCAA TGAAACTCGT GAATCCTATG
CTGAGGAGAT CGTTGTTCAA CTTCAGAGTG AGGGTAAAGA TGATGGAGAA GTGGAAGAAA
ATGTCAGGAG GATAGCGCAA TGGGCGGAGA ACTGGAGACA AAATCAGCAG GAAGAGGAAT
CATAG
|
|---|
| Protein sequence | MTTHHPRALP IVLITGTPGT GKTLHSQLLV SELSEADSPI PMKHLNIGDI VKEHGFHEGW
DEEWKCWIVD EERLLDWMEE VVNPRDGPAE TGFVIDHHDP SLFPERWIDL AVVLTCDNGI
LHDRLTARNY PANKISENIT AEIMMTCLNE TRESYAEEIV VQLQSEGKDD GEVEENVRRI
AQWAENWRQN QQEEES
|
|---|
| |