Gene CNH01360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01360 
Symbol 
ID3259180 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand- 
Start bp787586 
End bp788684 
Gene Length1099 bp 
Protein Length270 aa 
Translation table 
GC content51% 
IMG OID638258347 
Productproteasome subunit alpha type 5, putative 
Protein accessionXP_572324 
Protein GI58270336 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.829356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACG AAGCCTCTTT ATGCAACAGA CTCTATATAC GCTCACTTTT CTCTATCACA 
GCCCAAGATG TTTATGACAA GGTAAGCACA CACGCTGACC AGACACAGCT AACGGCTCCC 
AGATCAGAGT ACGACCGGGG TGTCAACACC TTCTCCCCAG AAGTGAGTTC GTCCACAGTT 
CGTCATCTTT CCGTCACTGA CGCTTCATGC AGGGTCGATT ATTCCAAGGT GCGCTATAAA 
CGGCGTGGGA CAACTAGCAG AGAATGCTGA CTCAACTATT AGTCGAGTAT GCTATGGAAG 
CGATCAAGGT AAATATGCCT CGAGTCTTTC CAACATTCAT TTCTAATCCA TAATCTTAGC 
TTGGTTCCAC AACAGTTGGT ATCACCACTC CCCACGGCAC CGTGCTCGCC GTTGAGAAAC 
GTGTCCCCTC TCCCCTCCTC GAATCCTCCT CCATCGAAAA AATCATGGAA ATCGACTCTC 
ACATCGGTTG TGCCATGTCA GGTCTCACAG CCGACGCCCG AACAATGGTT GAGCACGCTC 
GAGTCACAAG CCAGATGCAC GCGTTCACCT ACGACGAGCC CATTGGTGTG GAGAGCTGTA 
CCCAGGCGGT TTGCGATTTG GCGCTGAGGT TTGGTGAAAG TGTGGAGGAC GATGATGCGT 
TGATGGTAAG CACTATTCTT TCCATATTCT GAACCAGACT TTTTAACTTT CCATAGTCTC 
GACCGTTTGG TGTTGCGCTT CTTATTGCCG GTATAGATGA GAAGGGTCCT CAACTGTTGG 
TCTGCCCCAA ATATCCCTGC TGGCAGCATA CTGACCCCCT TCCCTTAGCT ACCACACCGA 
CCCCTCCGGT ACATTTGTCC GCTATGAAGC CAAGGCTATC GGCTCCGGTT CCGAAGCCGC 
CCAACAAGGT CTCCAAGATG CTTATCACAA GCAAATGACC CTCGCCGAAG CGCAATCTTT 
GGCGTTGAAG GTGCTCAAGC AGGTCATGGA GGAGAAGCTC GACGAGAGCA ATGTTCAACT 
TGCGCAAGTC ACAAAGGAAA AGGGATTCGA GATTCTGGGA GAGCAAGCAT TGAAGGGCGT 
CATTGAGACT CTTGCCTAG
 
Protein sequence
MSNEASLCNR LYIRSLFSIT AQDVYDKLTA PRSEYDRGVN TFSPEGRLFQ VEYAMEAIKL 
GSTTVGITTP HGTVLAVEKR VPSPLLESSS IEKIMEIDSH IGCAMSGLTA DARTMVEHAR 
VTSQMHAFTY DEPIGVESCT QAVCDLALRF GESVEDDDAL MSRPFGVALL IAGIDEKGPQ 
LYHTDPSGTF VRYEAKAIGS GSEAAQQGLQ DAYHKQMTLA EAQSLALKVL KQVMEEKLDE 
SNVQLAQVTK EKGFEILGEQ ALKGVIETLA