Gene CNF04460 details

Gene Information

• Locus tag: CNF04460
• ID: 3258417
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: -
• Start bp: 1293460
• End bp: 1295784
• Gene Length: 2325 bp
• Protein Length: 393 aa
• GC content: 50%
• IMG OID: 638257564
• Product: conserved hypothetical protein
• Protein accession: XP_571716
• Protein GI: 58269120

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00447085
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCTTATCAGG AGCATCGCTG CATCTCCCAT CCTCGTCCTT CGTCCTCACA TCCTTACAAG 
CGCCTCCGCC CTTCCTTGCT TGCTTCTTGT CTTATTATCC CCTGTGCCAT CGGCTTTCTC 
TTCGCTCTCC GGCTTTTCCC ATCCGTTCGG CTGCAAAAAA GCTACGTGGT TAGCACCGCC 
TACGCATATC ATACCACACT TTTGACGGTC CTTTGAGCCG TTCTCTGTCT CTTGAAAAGA 
CATCCTTTAT CCTCAATCGG CTCCTTGAGG TAAGTTTGTC TAATTAGCGA AGCGTCCACG 
GGATGCGATG CATAGGTGTT AGTGGTTGCT GATCGCATGT TCTCTTCCCA CCTGTCACTT 
TTCCCACTCG CGACCATCCC GATTCTTTTT GCACCGTTTG GCTCGCATTT CTTCCCCGAT 
GTCTGGAATA TTGGACGATG TTTTTGGCGG ATCAGACGTT GGCGCCGACG CCGATACTAT 
CGACGATTCA GATACCATGG CGGACCGTGA ACGTACGAGC ACTACATCGT CGGTAACGTC 
GTCTAGCACT CGAGTAGCTA CGTCTACCCT GTCTTCCAGT GCAAGGACGA CAAGCACGAC 
TTCTTCTGCC ACTCAGAATC GAGCCACTCC CGTCACTAGC AGTGGGTTGT TAAAACACTG 
CAAACCGAGG TTTAAATGTT GATATATTAT AGGCCGTACA TCTTCCTCCT CTTCATCCTC 
TAGCAGCTCT GCAAGGACAT CTAGCCGCAT CATCACGTCT ACTAGTTCTT CTACGACAAG 
CTCAAGGTCT GCGACAAGCA CCACTTCTTC CAGGTTGACC CGAACCAGGA ACACATCGAC 
GCATTCGTCC ACTCATTCAT CGACTCTTAC TTCATCATCT GCAACTTCAA GCATTGTACC 
CAGCACCACT GCTAGCTCGA CCAGCTCTAG CGCTACAGCA AGTTCGACCG TCGCTGCTGC 
TAATGCCAAT GGCAATCAAA GCAGCTCCAG CTTGAGCGGT GGTGCCGTGA GTATACAACT 
CGTTTGATCA CGCGCGGTAT ATTGACAACT GTTATAGATC GCTGGTATCG TCATTGGCAG 
TATTGCGGGC ATCGTCTTGA TTGCTTTATT GATCACTGCG GGTATCAGGA GGAAGTCTCG 
AGCTGAGCGA GCAAAGAGGA GGAGTTCTGT ATTCGATTGG GGTACCTCTG CCGGTATGGA 
GAACACCGAG GCTTACGAAA AGCCACGCGT AAGTCTTTGT CAGTGTCTCA TCCTCTGTAA 
AACATTCTCA TCATCTTGAT TTCTGCCTAG TACGACCCTC CTTCTGAATC GTTCGCCATG 
GCCGAAGCAA ACAACGGCCC CCAGCACGTT TCATACGCGA CCAATGACTT TGCCGTTGCG 
CCCCCTGCTG CGGAAAGGAC AGAGCCCTTG TCTTACGCGG AGCGACATAA CCCGCAATAC 
TCTTACCGTA ACAGTTTCCA ACCCGTATCG TTGGTCCCTG GTCTTCCTCC AGCCCAACCT 
CCTGCTCAAG CGCGGGGCTC GTTCCCAGCT CAGCCTCAGC AGCAGCAGCA GAATATGGCG 
GGCGTTGGCG GTGCTTCAGG TGCAGCTGGT GTAGGAGCTG CGACCGGAGC AGTGGCGGGG 
TCAGGAGCTG CCGCCGCCGC TGCTGGTCCT CGAGGCGTCA CCGCTGGCAC TTGGGTCAGC 
GTCAAGGTTG GCTTTGTCCG TTCTCTTGAG GACGAACTTG GTAAGTCCCC TTTCCCACCC 
CCCAATGCGT ACAAAGAGGC AATTTAATAT ACAGTTAACT GATGACCTTT TGTTTTAGCT 
GTCACGCCCG GGCAAAAGCT CTATCTTCAC GAGGTTTACG ACGATGGTTG GTCACTCTGC 
GAGGACGAGG AGCACAAGAA GGGTGTCGTG CCCGTCAACT GTCTCCAGTC TCTGCTTTAA 
GCAAGGAAAA ATTGCAAGTA AGCGGTCCGT CATTAATCGT CAGGAGGGAA AAGGATGTGT 
GGTTGTGAGC GAGATGCGTA CCACAAGAAT CCATTCGCAA AGCACTTGTA TTTAGGGAAA 
ATTCAAAATT CAAGATCAAT CTTGTCTTTC TCTTGTCGAA CGAACGGACC TGTCACATCA 
GTTTTCATTA GCTATTTTTA CTTTTACTCT TTTCCCTTTC TTTTTATATT TAAACTGCAA 
ATTAAACTGC AAATACCAAT ATTATGTTTG AACGAATGGA CAATACAAGC GAAATTTTCG 
TCATCTCTCT CTCGCGTAGT ACAAGTCGGT AATAGTGTTA CCCTTAGGTA TAAGTAGTGT 
CTTATTATTC TTGATTATTC TTGATGTATC GCTATATTTT TCGGA 

 

Protein sequence

MADRERTSTT SSVTSSSTRV ATSTLSSSAR TTSTTSSATQ NRATPVTSSR TSSSSSSSSS 
SARTSSRIIT STSSSTTSSR SATSTTSSRL TRTRNTSTHS STHSSTLTSS SATSSIVPST 
TASSTSSSAT ASSTVAAANA NGNQSSSSLS GGAIAGIVIG SIAGIVLIAL LITAGIRRKS 
RAERAKRRSS VFDWGTSAGM ENTEAYEKPR YDPPSESFAM AEANNGPQHV SYATNDFAVA 
PPAAERTEPL SYAERHNPQY SYRNSFQPVS LVPGLPPAQP PAQARGSFPA QPQQQQQNMA 
GVGGASGAAG VGAATGAVAG SGAAAAAAGP RGVTAGTWVS VKVGFVRSLE DELAVTPGQK 
LYLHEVYDDG WSLCEDEEHK KGVVPVNCLQ SLL