Gene CNF02960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF02960 
Symbol 
ID3258398 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp840479 
End bp841823 
Gene Length1345 bp 
Protein Length257 aa 
Translation table 
GC content47% 
IMG OID638257423 
Productconserved hypothetical protein 
Protein accessionXP_571371 
Protein GI58268430 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.392793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAACATCTT AAATTTCCCT CAACACTTTC CACTTTCTAC TCTCAACAGA TTCCTCTCTT 
CTGTAAAGCT ACATACTCCC CCAGCTATCA TCAGCACCAC CAGCGCACAA TCTTCTGACA
ATGTCTGAAA CAAAGCTCTC CAGCGGTCAC GATGATGTAG TAGAACGACA CTTAACAAAC
GACAACGCGT CCTTCGCACC CTCCAATGGT GCTACTGGTT ATCACGGAAC AGGCGGACCA
ATGACAAGGT TTATAACTCC GGGAGGTCAT CCCATGGACA CAAGTCAGCC AGCCTTCCCC
GTATTCCACA GGAAATTTGG CAATCCCGCC CCTTTGGGTC TGATCAGGTA GGTCCGTCTC
TCATTTGGTC TCGGACATCT GATCTGACTA GAATGTCGTT TGTCAAGTTT CGCAGCCACA
ACATTTCTGC TTTCCCTATT TAACATTTCA ACTCGAGGTA TCACCGTACA TAACGTGATA
CTTGGCATGG CCTTAGGCTA TGGAGGTCTT TGTCAGATCA TCGTGGGAAT CGAAGAATGG
GCATGCGGCA ACACTTTTGG TGTAAGTGGG TCCTTCCTGC TGCTTGTTCT GAATCATCAG
AGAGCCTTTG ATTCATGGAA AAACAATTAG GCAACGGCGT TCTGCTCTTA CGGCGGCTTC
TGGCTTTCTT TCGCAGGTGG GCATACTTCG TCATTAGTTA CGAAATGGCG TACTCACTGT
TTTCTGCAGC TCTTTACATT CCACAATTTG AAGTGCTCGC TTCGTATGAC GATCCAGCCA
TGCTTGACAA CGCATTGGGT CTGTATCTTG TAGCTTGGGC CCTCGTGACA TTCATCCTAT
TGCTTGCCTG TCTTCGATCG TCCGTCGCCC TCATTTGTGT ATTCGTTTTC CTCGACATCA
CCTTCTGGTT GCTGTGAGTT AAATAGCTTA TTCCTATCTT CGACAGTTAC CTAACACTTG
GTTGTAGCGC CGCGGGCTAT TTGGCACCCA GCACTAATGC TACCAAGGCT GGCGGCGCTT
TCGGTATCGT GAGTCCGTAC GATAGGAATA TATTACCGGA AAAGCTGACA CATGTCTGAT
CAAAGTTAAC TGCCGCGGTT GCTGCATACA CAGGGCTTGC CGGGATGCTT ACCAAGGATA
CCAGCTACTT CATTCTTCCT GTCGGCGACC TTTCTCATAG CACCTGAGTG TTTGCTTTCA
GGCTACTTCC AGATAGGTTG TAATACTCTG CCGTGGTCGT TTCAAATCGC GTTGATAGTG
CTGTGCGAGA AGTGTTAAAT ATTAGTTGGC CAGCCTTATT AAAGCTGTGT ACAAGTCAAA
AATATCATTA TGAAGTCGTT AAACT
 
Protein sequence
MSETKLSSGH DDVVERHLTN DNASFAPSNG ATGYHGTGGP MTRFITPGGH PMDTSQPAFP 
VFHRKFGNPA PLGLISFAAT TFLLSLFNIS TRGITVHNVI LGMALGYGGL CQIIVGIEEW
ACGNTFGATA FCSYGGFWLS FAALYIPQFE VLASYDDPAM LDNALGLYLV AWALVTFILL
LACLRSSVAL ICVFVFLDIT FWLLAAGYLA PSTNATKAGG AFGILTAAVA AYTGLAGMLT
KDTSYFILPV GDLSHST