| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF02530 |
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| Symbol | |
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| ID | 3258184 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | - |
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| Start bp | 732661 |
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| End bp | 736409 |
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| Gene Length | 3749 bp |
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| Protein Length | 893 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638257379 |
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| Product | peroxisomal hydratase-dehydrogenase-epimerase (hde), putative |
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| Protein accession | XP_571589 |
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| Protein GI | 58268866 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG2030] Acyl dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.874708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACACATACCA CTATTATTAT TTGACTTACA CAGCCCACCT CACAAGAATT CAACGCCTGT
GACTTCAAGC ATAGAACATT GCCACTACCA CAAACCGTAA CATGGCTCAT CAACAGCCGA
TCCCCTCGGC GGACAGCCTC AATTTTAAGG ATCTCGTGGT ATTAGTAACA GGAGCTGGCA
GCGGCATAGG GAGAACGTAA GTTTAGATTT GAATATAGCT CCTAGCAAAC TAATGTGGGG
ATCCTTGGGG TGTTTTGTCT AGGTATGCTC GCTTTTTCGC CGCCCGTGGA GCTAAAGTAG
TCATCAACGA TGTGTCGGCT GAAGCAGCTC AGGCGGTAGT CGATGAGATC GCGAAAGGTA
TGAGTTCTCA TACATCAATC TTGCAACATT TACCAATATT GTATCAGGCG GTGGAAAGGC
TATTGCTGCA CCGGGGTCCG TTACAGACGG TAGCACGATT GTTGCTCAGG CTGTGAAGGC
TTTCGGTACT GTTCATGTAC TTATCAATAA CGCTGGCATT CTCCGTGAGT ACTGAGAGAG
TCGCTTGGGA GCCTCTTAAG CTTACTCTAT TAGGCGACAA ATCGTTCAAG AATATGTCGG
ATCAGGACTG GGACCTGGTA ATTGCGGTAC ACCTGAAGGG TGCTTACTCT TGTACAAAGG
CTTGTTGGCC CTTATTCAGG CAGCAAAAGG TCAGTTACAC TTACTTAAAA AGTTTTCAAA
CAAAATGACT TATTTTCAAA AATAGTTCGG CAGGGTTGTG AACACTGCAT CAGCGGCTGG
CCTCTATGGC AATATGGGCC AAGCGAACTA TTCTGCAGCT AAAAGTGAGA TATCGGAAAT
TCAGTCTGCG TCGCATCAAT CTTTTCCTGA CGATTATCAT TGTAGTGGGG TTGATTGGGT
TTACTCGAAC GCTGGCAAGA GAGGGAGCCA AGTATGACAT CAAGGTTAAT GTCATTGCTC
CCGTAAGTAA ATCACCAAGA CATTGTACTA TACGCTGATA CATTGTCCCT TATAAGATGG
CAGCGTCTGC CATGACAGAG ACTATCATGC CTCCAGATAT GCTCAAAGGA CTGAAGCCGG
AATTCATTGC CCCTTTCGTC GGGATCCTTA CAGCCAGAAA TGTACGTCAG ATCGATCTAT
ACTGATGCTT GTTGTAGACG ATTCTGAATG TTACCCACAG GGCCCAGACG TCAGCGGCCG
TATATTCGAA TTGGGAGCCG GGTTTTTCTC TGAAGTGAGA TGGGAAAGGT CTAGAGGTAT
GTCTTGCTCC AAATAACAAA TGGACGTAAG TTGATGATAT AGAAGGGGCC ATTTGGAAAC
CTGATGACAC TTTCACTCCT TCTGCGGTGG CCGAAAAGTG GGCTGAAGCG CAGGACTTTA
AGGGAGCCGA GCATCCTCTT AACACCGAAG ATGGAGACAT GCTCGTGAGT GTATCTTGTT
CTAAGCAGGA GGCAACTGAT CAAGGTTTGG GAACCAGGGA TGGGCCAAGC AAGCTACGAA
ACTGCCTAGC AATCACCAGT CCTCTCCGCC GGTGGAATTC AAAGGCAAGA CTGTCATTAT
CACTGGATCA GGTGCTGGAC TTGGTCGAGC GTACGCTTTG ATGTTCGGGA AGCTTGGCGC
AAATCTTGTG ATCAATGATC TAAGCAAAGA AAATGCCGAG AAAGTTGTCC AAGAAGTCAA
AGCAGGTGAG ATAAACTACG CCATGTTCTT ATGATTGATT TTGACACCGA AATATAGCTG
GCGGCCAAGC CGTTGCTGCT GTCTGCTCGG CTGAGGAAGG TGAGACTATA GTGAAGGCAG
CTGTCGACGC ATTTGGCACA GTTCATGTGC TGGTGGCCAA CGCTGGTATC TTACGAGACA
AGGCTTTTGT CAATATGGAC GAGAAGATGT GGGATCAAGT GATTCAGGTC CATATGCGCG
GTACCTTCAA GGTAAGTATC TTATCCTGCT GTCAAGTTTC GGATCCTAAC TCAAGTAAAA
GATTATCAAA GCTGTTTGGC CTATTTTCCA GAAGCAAAAG TATGGGCGAA TAATTACCAC
AGCCTCCCCA AATGGCATCT ATGGTACTGT TGGCCAAGCA AACTACTCGA CGGCCAAGGC
TGGTATTATT GGTCTGACGC GAACACTTGC TATCGAAGGA TCACGTTATG GCATTCAGGT
TAACTGTATC GCTCCCAGAG CGGCAACCGC CATGACAGCA ACGGTCTGGC CCAAAGAGCT
TATGGAAATT TTCAAACCCG AGACAGTGGC TCCTGTAGTT GGATATCTCG CGGCTGAAGG
ATGCGCGGAT ACCGGCACGT TTTATGAAGT ATTCGGCGGC TACGTCGCTC AGATGAGGTG
GCAGAGGACA TATGGAGCTG TTTTTCCAAA TGACAAGGAT ATCTCCCCGG AGGACATACT
CTCCAAATGG AAAGAAATTG TGACATTTGA CGATCGCGCT ACCAATCCCT CCTCTGGTGT
CGAAGCTCTC CAGCAAATCG TCGAGAATTT CAACAATACA AGTTCCATCG TTCATGATGA
GGTATCGTAT GAGGATCCCG ACGACACTGA AGACATCAAG GCGGCAAAGA GACAGGAGGT
GGACCCTCAT GAGTACAACT TCTCCGAACG GGATGTTATA CTGTACAATC TTGGTCTCGG
AGCGAAAGTC GATGAACTGC AATGGGTGTA TGAGAATTCT GATGGATTTT CTGTGAGTGT
GGCTAGTTCT TTTCGTCCAG GACATTGGTA ACAAAATTGA AGGCCATTCC CACCTTTGGT
GTCATTCCTC AATTCGGCGC TTCTCATGGG GTAGACATGG GTAATTTCGT CCCTAACTTC
AACCCAGCCA AGCTGCTTCA CGGAGAACAA TATCTCAAAA TTAAAGCCCC TATCCCCACG
AGCGGGACAC TAGTCAGTCA TGCTAGGCTT CTTGAGGTTC TCGATAAGGG GAAGGCTGCA
GCTGTGACCT TCATTATCGA CACAAAAGAC AAGAAGACAG GTGAAAGTAT CTTTGAAAAC
CAGAGCACTG TCATTTTGAG GGGTAGTGGC GGATTCGGTG GAAAAAAGAA CGGTAAAGGT
GGGTGGGCTA TGGGGTAATT GCCTTGTTAT TTTTGCTGAT GATTTCCCAT TTCAAGATCG
TGGTGCTGCC ACAGCTCTTA ATGTCCCACC TAAGAGGAAA CCCGACGCCG TTATGGAAGA
AAAAACCACA CTAGACCAAG CTGCCATATA TCGCTTGTCC GGCGATTACA ACCCTCTTCA
CATTGACCCT GACTTTGCAA GTATGGGTGG CTTCCCCAAG CCTAGTAAGC TCAGCATGTC
TTATCGGGAT GATTATCTTA ACTTATTCAT TTCCAGTTCT TCACGGTCTT TGTTCCATGG
GCATCGCTGG CAAGCATGTC CTTAAGACGT TTGGGTCATA CTCAGATATC AAAGTTAGAT
TCGCCGGTAC CGTCATACCT GGTGAGACCC TCGTTACCGA GATGTGGAAA GAGGGGAACA
AAGTCATTTT CTGTAGGTCT TAAAGAAGTA CGGAAAGCTT CAAGTATTCC TGCTAATAAG
GAACGCAGCT GCCAAAGTTA AAGAACGGGA TGCGCCTGCT TTAAGCAATG CTGCTGTTAC
TCTCATAGGG GCAGAGGGGG CTGTGAAGGC GAAGTTGTAA AGCATTTATG CGCCTTTAAG
AATCAGGTTG TTTTTTTGAA TTTTTGTAGC TTCGATTGTG TCCCGACAAA TGCCTTGAAT
TTGATTGAAG AATGAAGTGA AGAGCGCAG
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| Protein sequence | MAHQQPIPSA DSLNFKDLVV LVTGAGSGIG RTYARFFAAR GAKVVINDVS AEAAQAVVDE
IAKGGGKAIA APGSVTDGST IVAQAVKAFG TVHVLINNAG ILRDKSFKNM SDQDWDLVIA
VHLKGAYSCT KACWPLFRQQ KFGRVVNTAS AAGLYGNMGQ ANYSAAKMGL IGFTRTLARE
GAKYDIKVNV IAPMAASAMT ETIMPPDMLK GLKPEFIAPF VGILTARNGP DVSGRIFELG
AGFFSEVRWE RSRGAIWKPD DTFTPSAVAE KWAEAQDFKG AEHPLNTEDG DMLSSPPVEF
KGKTVIITGS GAGLGRAYAL MFGKLGANLV INDLSKENAE KVVQEVKAAG GQAVAAVCSA
EEGETIVKAA VDAFGTVHVL VANAGILRDK AFVNMDEKMW DQVIQVHMRG TFKIIKAVWP
IFQKQKYGRI ITTASPNGIY GTVGQANYST AKAGIIGLTR TLAIEGSRYG IQVNCIAPRA
ATAMTATVWP KELMEIFKPE TVAPVVGYLA AEGCADTGTF YEVFGGYVAQ MRWQRTYGAV
FPNDKDISPE DILSKWKEIV TFDDRATNPS SGVEALQQIV ENFNNTSSIV HDEVSYEDPD
DTEDIKAAKR QEVDPHEYNF SERDVILYNL GLGAKVDELQ WVYENSDGFS AIPTFGVIPQ
FGASHGVDMG NFVPNFNPAK LLHGEQYLKI KAPIPTSGTL VSHARLLEVL DKGKAAAVTF
IIDTKDKKTG ESIFENQSTV ILRGSGGFGG KKNGKDRGAA TALNVPPKRK PDAVMEEKTT
LDQAAIYRLS GDYNPLHIDP DFASMGGFPK PILHGLCSMG IAGKHVLKTF GSYSDIKVRF
AGTVIPGETL VTEMWKEGNK VIFSAKVKER DAPALSNAAV TLIGAEGAVK AKL
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