Gene CNE03560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE03560 
Symbol 
ID3257489 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp1009414 
End bp1011157 
Gene Length1744 bp 
Protein Length346 aa 
Translation table 
GC content46% 
IMG OID638256940 
Productdihydrokaempferol 4-reductase, putative 
Protein accessionXP_571198 
Protein GI58268084 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.50925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCTGCTGCA TAGTCTCCAT ACAATCCCTC AAATAGACCT ACTGCACACA ATACGAAACA 
ATTACAAGCA TGCCCGCTAT CCAGCCTGGA TCTTTGGTGC TCGTTACCGG TGCTTCTGGT
TACATCGCCG CGTGAGTACC ATCGGCCCGA AACGCGACAG CGAGATTGCC GAGAAACAAC
AATCGTGAAG GTCAGCGTAG AAGCGGTCTG CTTACGATCG TCTTAGCCAT ACCATAGATG
CCCTATTGAA AGAAGGATTC AATGTACGAG GTACAGTTAG GAGTCAGTCA AAGGGTGAAT
ACCTTGCCAA ACTCTTCAAG GGTGCAAAGG CCAGGTTTGA ATATGTAATC GTCGGAGATA
TCGCACAGGT ACGTTCGTCC TCTGCGTATT AGCCACAGTC CGAGGAAGGA GTTTGACGCC
CGATGTACAG GAAGGAGCAT TCGATGAAGC CGTGAAGAGT GTGAATGCAG TAGCTCACAT
GGCTAGGTAA ATAATTAAGT ACAACGAGAA AACCGCTCAT ATTGTCTATA GTCCTTACCA
TTTCAACGCA GTTGAGTTGG ACGAGTTGTT CGAACCTGCT AAGAAGGGTA CTACGGGAGT
CTTGGAAAGT CTCAAGAAGA ACAAGTGAGC ACCCATACTG TCTTACATGC AAGACGACAA
AATGACACTG ATATCAACAT TAGCCCCGAC TGTAAGCGGG TTGTAGTAAC AAGGTAAGCT
GCACAAATTA CATTGTACTA CGTGACAGGA CTGACATTCC CGTTAGCTCT GTGGCGGCCA
TCGTCAATTC CAACATTAAG CCTCCTCATA CGTGAGTTAG AATTTATACC GAGAAATACC
TTTGTTCTGA TGGTTTTCAG CTTTACCGAG GCCGATTGGA ATCCCGTCAG CCTGAAGGTC
TGCGAGGAGA AAGGCAGAGA TGCCGATGGC GTGAACAAGT ATCGAGGTTC GCAACATATT
TAATCCATAT CGATTGCCTT CAGAGCTGAC ATCGTCTAGC TAGCAAAACT CTTGCCGAAA
AAGTCTTCTG GAAGTTCTTC GAGGACGAGA AGCCGTCCTT CGATGGAGTC GCTATCAACC
CTCCGTTGGT ACTCGGTCCT ATCATACATG AATGCGATTC CCCCGAGTCC CTCAATACAT
CTGTAGGTTA GTGATAATTA GTACCTTTTC CATTGAAAAG AAGAGTCAGC TCACAGTATA
CGCATTTGAT ACATAGCCAA TTTTTACGAC TGGATGATCG GCAAGAAGAC GGAAAAAAAT
TTGCCCGAGG CTGGTGGTAA TTATGTTGAT GTGCGGGATT GTGAGCATGA TGCTTCTTTG
AATTAAACTT GCAAAGCTTA ATCGTTCAGG CGCTTTGGCT CACCTTCGCG CCCTCGTCGT
ACCGGAAGCT GCTGGTCAAA GGTTCATTAC TGGCAACGGT GCATATAATG GTAACGACTT
TTGCATTGTA AACATTTTTT CAGCCAAGTG GTGGAAAAAG AGGTTGACCC GATTATTTTA
GGCCCTCGCT GAGACGTGTC CAGACTTGAA AGGTGTTGCC AAGGGCAACG CCGATCCAGC
CTATAGGAAG AAGCTTATCG ACGAAAACAA TCACATGGAC GGGTCGAAGG CAGAAAAAGT
GCTGGGGTTG GCATATAGGT CCAAAAATGA GACTTTGAGA GACATGGCGA AGAGCTTAAG
GGCAAGGTTC AATTTCTAGC TGTATCTATT AAGGAATGAG GTGAAAATGG AAGATGAATC
TGCT
 
Protein sequence
MPAIQPGSLV LVTGASGYIA AHTIDALLKE GFNVRGTVRS QSKGEYLAKL FKGAKARFEY 
VIVGDIAQEG AFDEAVKSVN AVAHMASPYH FNAVELDELF EPAKKGTTGV LESLKKNNPD
CKRVVVTSSV AAIVNSNIKP PHTFTEADWN PVSLKVCEEK GRDADGVNKY RASKTLAEKV
FWKFFEDEKP SFDGVAINPP LVLGPIIHEC DSPESLNTSV ANFYDWMIGK KTEKNLPEAG
GNYVDVRDCA LAHLRALVVP EAAGQRFITG NGAYNGNDFC IALAETCPDL KGVAKGNADP
AYRKKLIDEN NHMDGSKAEK VLGLAYRSKN ETLRDMAKSL RARFNF