| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE02640 |
|---|
| Symbol | |
|---|
| ID | 3257647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | - |
|---|
| Start bp | 707914 |
|---|
| End bp | 709902 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638256854 |
|---|
| Product | cell wall organization and biogenesis-related protein, putative |
|---|
| Protein accession | XP_571215 |
|---|
| Protein GI | 58268118 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTTTCAACGC AACATCTACG CCTATCCCTC CTCCCTTTTC TCACATAAGT ATGAGGACAT
CTCCTCACAC ATGCGTGCTC CTCCTGTGCG CAGCCTCTGT CATAGCAACA CCGCAACGCC
AAGCCCCAAT CCAACTTCCA CTCTCGGCAT CTTCCCCATC CTCCGAGTCT TTTGCTCCTG
TACAGAGATA CGATGGTGAC CAAGTATGGA GAGTCAAACT AGGTGGGGAA GATATACGGA
GGATAGAGGA TATTGTGGAC CTTGTTGAAG TGTGTACATA TCCCTCGTGC TTTACAACAC
TCGTCACTTG TCATTCGTTC GATCTGACAT CGTATGTAGA ATCTCCAACT TGACATATGG
AGAACAACAT CACGTTCCCT GGATATACGC CTCAACGAAC TACAGAAGAA CGACCTTCAA
GAGCTTTTAC ACCCCGACAC ACTGTTCGAA CCTTTTATCA CCAATGTTCA GTCACTCGTC
GACTTTACGA CTCCTTCCTA CTACTCAGAC ATCATCGATT CCTCCCTTGA AGTTAATGCC
GATCAATCTT TGCGAAACGG ACAACCTCTA CAAATATCAA AGAAGAACAA AAAACCCAAG
ATTGACCCTT TCAATCTAAC AACGCTCGCC ACACCCTTCC ACGATTCCTA CCATACTCTC
AAGGATGTTC ACCAATTTGG TGACGCCTTG GTGGAGACTT TTAATGGAAA GGAAGGCATT
GAAGTGTGGA GCTTTGACGT CGGCACGACC TGGGAGGGAA GGCCTATCAG GGGATGGAGT
GCTCGTCTCA TGAGGAATGA GTCGGATGTC AATAACAGCC AGCGAAGGCG ACGAAGCAGA
GTTACGGAGG AAGACGAGGA ATTACAAAAG GAGATTGTCA TCATAAGCGG GCAGCATGGT
CGTGAGGTAC GTGCGCTCTC TGATTTTTGA GCTGTTCTTG ATGGTTAATG AACTCCATCG
TGTGATAGTG GGTTGGACCT TCATCTGCCC TTTACTTTCT ACATTCCCTG CTTCTCACCT
CTCTCTCATC CCCGTCTTCC GAAGCAGCTT TGATGTTGAG CAAGTTCACT TTTTCAGTTA
TCCCTACAAT AAATCCAGAT GGCTTTGTCT ACTCTCAATC CCATAGGATG TGGAGGAAAA
ACAGACAACC CGTGGGCCAC AAGTCTTGCG TCGGTATCGA CTTGAACTCA AACTGGGCGT
ATAAATGGAA GAAGGAGAAG AAGGAGAAGC CTTGCAATGA AGGTTACCGA GGGAAGGCCG
CATTTGAAGC CTATGAGACC AAGGCTGTCG GGGAATGGCT GGCCAAGGGA GCAGAAAGGG
GTACGAGGGT CAGGGCATTT GTTGATTTAC ATAGTTATGG ACAGCTCTGT AAGTCGCTTC
CATTTGCCCA TATCAACTTA CTGATGTGAC TTGGCAGTCA TGTTCCCCTT TGCCCATTCA
TGTAATGACT TCCCTGCCGA CGCAGAAATG CTCATGGAGG CCGGTTTGGG AGTTGCCAAA
GCAATCAGAA CTGCCCATGG AGAAACTTAT GAAACAGGCC AAGCGTGCGA CCTGACTTAT
AGGTTCGTAC CAAAGTCATC AGTAATTGAC AAAGTCTGAC TGTATATTTG ACAGGGCACC
TGGTGACTCG GTCGATTACG CCTATGGAGT AACAGACATT AGGTGGTCAT ACTCTGCGGA
GCTTAGGGAT ACCGGCACAG TAAGTGGATT GTTCCACTTT TTGAATCCAA CGTCCGTTGA
CAAATCGAAT CAGTACGGGT TTATGCTCCC CAAAACTCTC ATCCGACCGA CAGCCGAAGA
GATTTCGGCC GGTATATTAC ATCTTGCCAA ATTCATCTAC GTGCTTGAAA TTGCGGATTG
ATTATTGTTT CAAGCGTAAT CCTTTTGAAC TCTCGATGTA CAATTGTATC TGCAACGGGA
TTATGGTGAC TCTTACCTTC AAGTAATGCG CATGCTGTGA GGCAACGGGG AGTCAAACAC
CAATATTGT
|
|---|
| Protein sequence | MRTSPHTCVL LLCAASVIAT PQRQAPIQLP LSASSPSSES FAPVQRYDGD QVWRVKLGGE
DIRRIEDIVD LVENLQLDIW RTTSRSLDIR LNELQKNDLQ ELLHPDTLFE PFITNVQSLV
DFTTPSYYSD IIDSSLEVNA DQSLRNGQPL QISKKNKKPK IDPFNLTTLA TPFHDSYHTL
KDVHQFGDAL VETFNGKEGI EVWSFDVGTT WEGRPIRGWS ARLMRNESDV NNSQRRRRSR
VTEEDEELQK EIVIISGQHG REWVGPSSAL YFLHSLLLTS LSSPSSEAAL MLSKFTFSVI
PTINPDGFVY SQSHRMWRKN RQPVGHKSCV GIDLNSNWAY KWKKEKKEKP CNEGYRGKAA
FEAYETKAVG EWLAKGAERG TRVRAFVDLH SYGQLFMFPF AHSCNDFPAD AEMLMEAGLG
VAKAIRTAHG ETYETGQACD LTYRAPGDSV DYAYGVTDIR WSYSAELRDT GTYGFMLPKT
LIRPTAEEIS AGILHLAKFI YVLEIAD
|
|---|
| |