| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE01100 |
|---|
| Symbol | |
|---|
| ID | 3257561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | - |
|---|
| Start bp | 308364 |
|---|
| End bp | 311190 |
|---|
| Gene Length | 2827 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638256698 |
|---|
| Product | long-chain-fatty-acid--CoA ligase, putative |
|---|
| Protein accession | XP_570856 |
|---|
| Protein GI | 58267400 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA GCCGCGCGCG ACGAAAGATC CATCGGGTGT GCCTGGCTCT GAATATCCGG
AGTCGAAATG TTGACACATG GAACATTTCT TTGTCGGTAC GTCTATATAC CATCCAGGTT
GTTTAGAAAT TCTTACACTG TACGTGTCGC AATCCCATAG CATATAGACA ACAGGCCATG
GAAAAGCAGC TCAGCATAGC AGAGTGTACG CCATTGACCT CTCAAAGAAG CACTCGAAGA
CCACAAGCTG ACAGTGATGT TCAGGTGACC GCATCTTGAC AGGTCCTGGC TCTCCGATGG
AGACCGAGGA GAAGGTGATC TTTGGTAGAC GTCTGACTGT ATGGAAGCAT GTGAGTGATG
TTCTTTGTAA TTCGTGTTGT GCGTATCTGG CGATACTGCT CCTACAATGG TGACACGTCG
ATATTTCTTG GCATTAATCA GTTCTTAAAA ACAGCTGCCC TCAACGTTTC GAGACTTCCT
GATCTTCAAC CTTCAGAAGT ACTCTCAGAG AGAGTTCATA TCATCGCCTT TACCTCTAAG
GGAACCTTTC AAATCATCCG AAACCCTTAC TGACAAAGTC GATCCAAGAG AACACCTGAC
TTTTGGTGAT GTTTTGGACC GTTCACTGAA ATTGGCAGCA TGGATGCGCA GTCGAGGGAT
AAAAATGGGG GATAGGGTAG TAATTGGGGG TAAAAACTGT ACTGGGTAAG TTCAAGTACT
TGTTGGAATT ATGCTGATTG CTCGTCTAAA GCTGGATCGT GTCGTTTATC GCTGTCCATC
TGATCGGCGC AGTCACTGTG TGCTTGAATT GCTGGGTGTA AGTTTTAGGA TTCAAAGCAA
GGATAACTGA CTTCCTCACT TCTTTAGTCC AAGAGAGCAA ATGGTTTACT CAATAAAGAT
GGTCGAGCCG AGCTTAGCAC TTCTGGACGA AGAGCGCGCA GAGATCCTCG GCCCATTCAC
CCACGTCAAG GAGAATGGCC TTCCTCCTGT GAGTTTGAGT CACAATACCT AAACTCTTGA
TCTTGATGGA CGAAATAGAA ACTGATCAAA CTTTAGATGT TCTGCTGGGC AGAATCAGGA
CATTTACCTT CGGTTGTGGA GATCTACAGC ACCCCCAACA ATCAACGGAC AAAAGAAGTT
TTGGATGGCG TGGGTCTCGA TGGACTTGGA CCCGAAAGCG ATGCTGTCAT TTTCTATTCC
TCTGGGTGAG TATACCCAGC GTCTTAGATT GTCAACGCTC ATGTCTTTTG TTCTATACAG
GACGAGTGGC TTCCCGAAAG CTGTTCTGAG TACTCAACGG ATGGCCTTGT CCAACGCCAT
CTCTGGCATG GTCGGTATGT TACATGTTCC ATCTCAACAA CCACCTGATT GGTCTGACAC
ATTACGATAG CCACGGCCCG AGCAGTCCTT CGCGCCGGCC TTCCCCTCCC TCAGCCGCCC
AAGCCGACTG ACCCCCAACG AGTCGTTCTC CTTTCAATCC CCCTTTTCCA CGTTACTGGT
TGTCTCTCCT GGCTTCTCCG TGCAATCACT AATGGTTCAA AATTTGTCAC CTCTCGAAAG
TGGGATGTCA AGGAAGCTGT GAGGCTGATT GTTGAGGAAG GGGTTCATAC CGTGGGAGGG
TAAGCCTTGA AACCATTTGA TCAGAGTGTC ATGAGCTGAC TACGCATCAG TGTACCGGCT
ATTGCCAGTC AGATTTTACA GTCGCCTGAC CTACCCGATA ACACTACCCT CGACAGCATC
TTTTACGGAG GAGCGCCTCC TAGCAAACAC ATGGCCAATG AAGTGAGGAA ACGATGGCCC
AAAGCAGCTG TGTAAGTCGA CGTCTCTGCT CTTGCTACGT GAATGCTGAT CAGTTTCTAG
CATCCATGGA TACGGTTTGA CAGAGACAAA CGCTGTTGCT TGCGCCGTCT GTGGTGCCGA
CTATCTTTCA CGTCCTGACA GCACGTATGT CTCTCTCTTT TGCAATCAAT CGTAACAAGC
TAATGAAGAT ACGCTCACAG TGGCCCTCCT GTACCCATCT GCGAAATCCG CATTGTAAAC
CCCGATACTC GAAAAGCATT GCCCACGGGC CAGCAAGGAC TTATTCTGAT CAAAGGCGCT
CAGGTCATGA AATGTTATTA CGGGAATGAG CGTAAGTTTG GGATAATTTC AGAAGGCATG
TTGTTAAATT GTTTTATCGT GTAGAGGCCA CGAAGCAAGC AATTGATGAG GAGGGCTGGT
TGGATACAGG TGATGCTGGA TATCTCGATG AAGAAGGGTT CTTGTTCATC AAAGATCGCT
GTAAGCACGT ACTTTCACGA GCAATAATAT CAATATTAAC ATGCAAGCCA GTGAAGGATC
TCATTATCCG CGGCGGCGAG AACGTGAGTA CAGCATTATC ATTTAAATAG GAATTAGCTA
ATGATTCAAA TGGACCCCAG ATCGCATCAG TGGACGTGGA AAACGCCCTT ACCTCTCATC
CGCATATTGA CGAAGTCGCA GCAATCGCCC TTCCACATCC GATCCTTGGG GAAGTTGTGG
GTGCTGCAGT CACGCTTCGT GAATCTGCAA AGGCAAGAGG GGTAAAGGTG ACGGAAGAAA
GTATCTTGGG ACATGTCAGA AGTAAACTGC CGAAACATGC CGTGCCTGCC ATGGTAATGA
TTTGGGAAGG GAGTCTGCGT GAGTGCATAA TTCAGGTGGA AGATAAAGGG TAATAGGGCT
GATCGTACCT TCAAAAGCGA AAAACGTGAA TGGTAAAACC ATGAAGAAGG AAATCAAAAG
TGTAGCCATC AAAGAATGGG AACGAAGGCA GGGTGCGAAT AGCAGGGGAG CCAAAGCGAA
GCTTTAA
|
|---|
| Protein sequence | MKRSRARRKI HRVCLALNIR SRNVDTWNIS LSAMEKQLSI AECDRILTGP GSPMETEEKV
IFGRRLTVWK HLPSTFRDFL IFNLQKYSQR EFISSPLPLR EPFKSSETLT DKVDPREHLT
FGDVLDRSLK LAAWMRSRGI KMGDRVVIGG KNCTGWIVSF IAVHLIGAVT VCLNCWVPRE
QMVYSIKMVE PSLALLDEER AEILGPFTHV KENGLPPMFC WAESGHLPSV VEIYSTPNNQ
RTKEVLDGVG LDGLGPESDA VIFYSSGTSG FPKAVLSTQR MALSNAISGM VATARAVLRA
GLPLPQPPKP TDPQRVVLLS IPLFHVTGCL SWLLRAITNG SKFVTSRKWD VKEAVRLIVE
EGVHTVGGVP AIASQILQSP DLPDNTTLDS IFYGGAPPSK HMANEVRKRW PKAAVIHGYG
LTETNAVACA VCGADYLSRP DSTGPPVPIC EIRIVNPDTR KALPTGQQGL ILIKGAQVMK
CYYGNEQATK QAIDEEGWLD TGDAGYLDEE GFLFIKDRLK DLIIRGGENI ASVDVENALT
SHPHIDEVAA IALPHPILGE VVGAAVTLRE SAKARGVKVT EESILGHVRS KLPKHAVPAM
VMIWEGSLPK NVNGKTMKKE IKSVAIKEWE RRQGANSRGA KAKL
|
|---|
| |