Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE00160 |
Symbol | |
ID | 3257520 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | - |
Start bp | 32227 |
End bp | 34506 |
Gene Length | 2280 bp |
Protein Length | 674 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256598 |
Product | expressed protein |
Protein accession | XP_570707 |
Protein GI | 58267102 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.377444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TATCCAAATA ATTTGCTACA TACCCACTGA TGACGCTCTT CGGTACATCC ATTCTGGATT TATTGTTTCA TTCATTTAAA TAATTAGACA AACAACAATC GATCACCAGA GAAAATCCCA CCTATGTTTG GTGGATTATT GCAATTACTA CCGACTCGTC AATCGTTATC ATCCATCAAG GCCATCCTAC GCTGGCGTTC TAAGCCCTTA CATGTCGCTT TAAATCCCTT AGACAGAAAC CTTTACCTGT CACCAGCTTC CGCGAGTTCT GCCGTCTATC AACATCAATC ATCATGTCTG CTTCGAACGT GCTCGAGGGT GACCTACGAG CCAGCACAAC TTTTTGCGAC GATAGGCTTG GGTAGCCGAT ATATCCACTC TTCAGGGGGT ACTGGAAATT CCGTTGTGAA AATCCTCAAA GATATAGGGG AGCTGAACAA TAGAGTATCT GCGGAGAACT CAAAAACGGA GAAGCAGAAC ATTATTGCAG GATATCCTTG GCTTCGGGAG CTTCTCGAGT AGTGAGTCTT CGACTTGCGA ATGCATACAT TTGCTATGTT ATTACTGATG TCTAATAGCG TATATCATCC AGATCACCGC ACTTATATGA CATTTTCGTC TCTCAAGTCC TTTATTGATA ATTCACCCAA ATCTTTCAAG TCCATTGATC TCCCTTCAGT TGCCACTTCC GATCTATCTC TCATTGAGTT ATTCGATCTA TTATCTCAAA AGGCCGTAAC AGGTCATGAC GCTAAGAGGA CGGTGGTAGC GTTTCTGAAG GCGAATGGTG TCATAGGAAA TGACGAGCTG TTAAAGACAT TTGGGAGGCT GTTGGATAGA AATTTAGTGG CCGGGTTTGG GGCGAAGACG TTAGTAAACG TACCGTGGGT GGAAGGAGAG TCGGAGTTGT CAAATACAGT GTCACCTCCA TCGCTATCCA AAAAATATCC ATCAACGCAG ATTACTTCAT CGTCCAAACC TTCCCAATTG GCGTCTTCAC CGAGACCAAT CTCTCCTTCC GTAAGCGGCG TTACACCCAT CCTCCCAACC TTCAGACCTC TCGACAAATT CGAAGTTGCC CTCGGTAAAT CGCTCGAACC ACCATTTTCC TCATTATTCA AATCCGAACC TGTTTGGTAT GCTTCTCGCA AACTTGATGG CGTCCGATGT CTCTCCTTCA TCGACGTTCT TGTCCCCTCC TCCTCTTCCA AACCCCTCGA GTTCGTCCAT GGTCATTTCG TCTCTCGTTC TGGTAAACCA TTCCACTCCC TCACCAAACT TTCTGAACAA CTTCGCCTGC TTGTCAAAGA CCATCCAGAC AATCCCTTGC GAGAGTGGTT GAAGAACGAT CCGGAGGTGG TTGAAATCCG TGAAACAGGA GTTGTAAAGC GGTTGGTACT CGACGGAGAA ATTTGTTTGA TGCGCCCAAA AACGGAGGAG GAGTTGAAGG TGGTCCAGCC GAGAGATGAC GGATCAGCGG CGGATAAGAT GTGGATCGCA TCAGACCCTT TCATTGAAGA CTTCCCTTCT ACTGTCTCAG CCATACGAAA AAGCGGAACC ATCCAGCACC TCTCTTACTT TGTTTTTGAC GTCCTCTCCT GGGCCGAGGT CTACGCCAAA CAAGGTCTCC TTCGACCCGG CCTAGGAAAG AAGTTTAGCG AGCGGATAGC GGATGTTGAG AGGCTGGGAA ATTGGTTGAA CAAGTCATTA GCATTGGAGG GGATAGATGA GCAGGAGAGA ATTATGAGGG CTCTGGTGCA GTGCAAGGTT GAGAGACCGG AGGATGTGGA GGACATGGTG AAACGCGCGG CGAATGAGGG ATGGGAGGGG TTGATTTTGA GGGCGGATCA GCTTTATAAG GGGAAGAGAT CGTAGGTGAC CGTTGTGTAC CTTCGGAAAA TCAGCGAAAG CTGACTAAGG CTTAGATCGG ACGTTCGAAA GTTCAAGAAA TGGCAAGACG CCGAGTACGT CGTCAAATCA GCAGATACCA ACATTATGCG CCTTGCTATC AACGGTGTTT TCGACGAGCA TGAAGCTCTC GCTAGTGTCT GGATTGAGCA TAAGGGGCAC CCTGTCTCCG TAGGATCTGG GTTCTCAGCT GAGGAGAGGC TGAGATATGC AGAGAAACCT GAAGAGATTG TGGGAAAGAC GATAACGGTG GAGTATTTTT CCGAGAGCGA GGCAATAGGA AGAGAAGGAG CGAAAAGTTT GAGATTTCCT AGGGTGAAGG CGATATGGGG TGGGGAGAGG GATTTGTAGA GTTGTATTTA AAAAAAACGA
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Protein sequence | MFGGLLQLLP TRQSLSSIKA ILRWRSKPLH VALNPLDRNL YLSPASASSA VYQHQSSCLL RTCSRVTYEP AQLFATIGLG SRYIHSSGGT GNSVVKILKD IGELNNRVSA ENSKTEKQNI IAGYPWLREL LEYVYHPDHR TYMTFSSLKS FIDNSPKSFK SIDLPSVATS DLSLIELFDL LSQKAVTGHD AKRTVVAFLK ANGVIGNDEL LKTFGRLLDR NLVAGFGAKT LVNVPWVEGE SELSNTVSPP SLSKKYPSTQ ITSSSKPSQL ASSPRPISPS VSGVTPILPT FRPLDKFEVA LGKSLEPPFS SLFKSEPVWY ASRKLDGVRC LSFIDVLVPS SSSKPLEFVH GHFVSRSGKP FHSLTKLSEQ LRLLVKDHPD NPLREWLKND PEVVEIRETG VVKRLVLDGE ICLMRPKTEE ELKVVQPRDD GSAADKMWIA SDPFIEDFPS TVSAIRKSGT IQHLSYFVFD VLSWAEVYAK QGLLRPGLGK KFSERIADVE RLGNWLNKSL ALEGIDEQER IMRALVQCKV ERPEDVEDMV KRAANEGWEG LILRADQLYK GKRSSDVRKF KKWQDAEYVV KSADTNIMRL AINGVFDEHE ALASVWIEHK GHPVSVGSGF SAEERLRYAE KPEEIVGKTI TVEYFSESEA IGREGAKSLR FPRVKAIWGG ERDL
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