Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE00020 |
Symbol | |
ID | 3257642 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 1785 |
End bp | 3474 |
Gene Length | 1690 bp |
Protein Length | 405 aa |
Translation table | |
GC content | 52% |
IMG OID | 638256584 |
Product | conserved hypothetical protein |
Protein accession | XP_570691 |
Protein GI | 58267070 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGAA TTCTCACAGT GAAAAACTAT GAAGGAAACT ATCCAGGTTC GAGTCGCGCC GCCTGCAAGC CGGGTATGTA TATGATTTTA CAGAGCTTAA TAGGGCTTAT AGTGTCATAA GCTAATGCTC TCCCGGCTGT TAGATCGGAT CAAAAATATT CATGCGCTAT TTATATACAT CAGCGGCGAT TACCCTCCGT CCTGCCCGTC TGTCACATAC AAAAAATTTC CACCACAGCG CTTATCGGGC ACCATGCTTT TGATTCTCTC CCCCAGCTGT TAGGGTGATG CACGGGTACG TCAGCCGTTA TTTAGCGTTC GTGAGTAGTT TGCAATTCGT TCTCGATTCT ACATCGCAAA AAAGGACAAT GACGTCGCCG GCTCGCACTG TATCAAAGGT GACATGAATA GCTAAAGCGA AAAGAATGGA AAAAAGCCTT ACCATCTTGC CCCCTTTGCT TCCCCATTAT TTCCGCCGCC CGGTTCCTCT TCATCTTCGT CCCGTCGCTG CAACCCCTCG TTTTCCCATT TTTTCCCGAC TTCGAGACCC CACTGTCTGG CTCCGTGTCT TCTCAATCTA AAGTCGTCCC TGCCGCATGG TCAGTACGTC GAACAACGAG AAGGCGAGAA AACCCACATC TCGCCGCCAT CGCTACGAAC GCTTTCTTCT ACGAGATGAT TATCGGGGAC GGCTTCCCCG ATGGATCTCG CGTTTCACAG GCTACCGTCA GCCCGGCGAT GAGCCGCCTT ATGATCCTCT ACCGTTCCCG CCTTTTAACT GGTTGGTCAA GATTCCTTTG AGGGTCGAGG TATGGATATT CGCTTGGATA GGCTGCTTTG GAGGGATCCT CCTCATTGAA GCCATCATGT GCACCAACAC AGCTTTTCGC AATGTGTACT CCTCCCCTAT CATCATCACT TCCTTCGGCG CATCGGCCGT CCTTCTTTTC GGTGCAATCG AGTCACCGCT TGCTCAACCT CGCAATTTCA TTGGCGGACA CTTCGTTTCG GCTCTGGTTG GGACGGCTAT CACCAGGCTC TGGGTCCTCA ACCCACGTTA CCAAGATTAT CTGGATAATA CAGGCTTTCA TGGCAACACT TTTGTGAATG GGGGACTGTG CATGGCAACC GCGGCCTTGG CGATGCTGAT CTCAGGAATG GTCCATCCAC CGTCAGTGCA GCACCTATCA GATTTCCAAA ATGCGCAGGC GCTTATGACC TAAGCCTCAG GTCCGGGGCC ACTGCACTCA ATGCTGCAGT CCAAACCTCG GTCGTTTCCT TGTCTTGGCG GTACCTACCT GTCGTTCTCG CCTCCGCCCT CATCATGCAA GGATGGGCCC TCATCATCAA CAATCTGGGC CGCCGGCGGT ATCCGATCTA TTGGTGGTCA CCAAAGCAGG TATTCGTCCG ACCCGAGGTC TTAGAACACG AGAACGACGA AGAAACAGCG CTACGAACGC TTCAAGAAGG CCCTCTTCGT AGTGCGGAGG ATGCGGGAAG GACCAGGGAG ACGTTGTTGG AGGCTAGAAT GCAAGGAGAG GGAGCAGGCG GCGCGGATTT TATGCAGGAT CCATCCGGAC AAAATAATAT TCCCATGGGG GCCGTCGAGA GTCCGGAAAT TGGTGTTCCA GAGCCGCGAT TAAAACCGAT GACTGAAGGC GACCGACGTC GAGCAGAAGG CTTTGATTAA
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Protein sequence | MRRILTVKNY EGNYPGSSRA ACKPALPSCP LCFPIISAAR FLFIFVPSLQ PLVFPFFPDF ETPLSGSVSS QSKVVPAAWS VRRTTRRREN PHLAAIATNA FFYEMIIGDG FPDGSRVSQA TVSPAMSRLM ILYRSRLLTG CFGGILLIEA IMCTNTAFRN VYSSPIIITS FGASAVLLFG AIESPLAQPR NFIGGHFVSA LVGTAITRLW VLNPRYQDYL DNTGFHGNTF VNGGLCMATA ALAMLISGMV HPPSGATALN AAVQTSVVSL SWRYLPVVLA SALIMQGWAL IINNLGRRRY PIYWWSPKQV FVRPEVLEHE NDEETALRTL QEGPLRSAED AGRTRETLLE ARMQGEGAGG ADFMQDPSGQ NNIPMGAVES PEIGVPEPRL KPMTEGDRRR AEGFD
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