| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND06150 |
|---|
| Symbol | |
|---|
| ID | 3257042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | + |
|---|
| Start bp | 1695872 |
|---|
| End bp | 1699212 |
|---|
| Gene Length | 3341 bp |
|---|
| Protein Length | 918 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638256555 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_570521 |
|---|
| Protein GI | 58266730 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.802079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTTCTCAAA AGGTTTCCTT ATAACACCAG CGGAGAGGGC TTCCAGATCT GCTGACAACA
TTACCTATAG CTCTTGAAGA GCACCAGCAC ACAATGTCTC AACCCCTCAC CCGCCGCGGC
CCTCTTCAGC CCCACCCTTC ACAAGCGTCG ACCTTTACTT CAAAAGTTAC CGTCGAATCT
GAAGCTGATG CACGTTTGAG AGATCACCAT TCCGGGCGCA CAGCCCAGAA AACTGCGTTT
GGCGGGAAGA GAGGCTCTGC AGCGGTAGGA CGGATTGGAA AGAGGGAGTG GACGATGATC
GGGGGGATGG TCGTAGTCGC GCTTTATGTG AGACTGTACA AGCTTGGCAG GCCGAGCAGT
GTCGTGTGAG TACCTTGCGT TTGATAAGAT CATGGGACTA ATCGGGAGCA GCTTTGATGA
AGTGCATTTC GGAGGTTTTG CCATGAAGTA TATCCGGCGC AAGTTCTTCA TGGACGTGCA
CCCTCCACTG GCAAAACTCT TGGTCACTTT GAGCGCGTGG ATCGGTGGAT TCGACGGGAA
GTTTGATTTC AAAGATATTG GAAAGTGGGT TTCAATGATG TCTGAAATGT CGAGCAACTG
TTAATTTTGA CGTAGGGATT ATCTTGAACC CGGCGTTCCC TATATTACCA TGAGATTCTT
TCCGGCCGCC CTCGGTATCG CTCTCATCCC TCTCGCCTTC CTTACTCTTC TCGCTCTTCG
TCTTTCACAC ACTTCTGCAC TTCTAGGTGC CCTTCTTGTC ACATTTGATA ACGCCCTCAT
CACTCAATCC CGACTCATCC TCCTAGACTC CTTCCTCGTC TTTTTCACCG GTCTTACTAC
CCTTTTCTGG GTTCGCTTCT CCAATGATGA TTCTGAAGGC CGAGCGTTCA CTAAGCCATG
GTGGATAAAT TTGCTTTGTA CCGGCCTCAG TCTTGGTGCT GTCGTCTCGT GTAAATGGGT
CGGCCTGTTC ACTATTGCCA TGATCGGCGT CGGAACCCTT CGTCAGCTCT GGCTTCTCCT
CGGTAATCTC AAGGTTACCC CCAGGCAGTA CATCAGACAC TTTGCGGCTC GTACGCTGTG
CTTGATTGTG GTACCCTTGA CTTTCTATAT GCTAATGTTT AGGATTCATT TCTGGATCTT
GAACGAAAGC GGAGATGGAG ATGGGTTTAT GAGCTCGGAG TTCCAGCATA CTTTGCAGGG
TCATGGCATG GCTGACACTT TTGCTGGTAA GCCCCCATTT CCCACCAGGA TTTTCAAGAC
GTTGACAATC AATAGATGTT GGTTTTGGTT CAAAGGTGTC CATCCGACAT GTTAACACCC
AGGGTGGTTA CCTCCATTCA CACCCTCACC CTTATCCCGG GGGCTCTAAG CGTAAGTTGC
GTGTTGTAAC ATTTTAAGCC ATTACTCACC GTACGCAGAG CAACAAATCA CTCTCTACCC
CCACCGAGAC GACAACAACG TTTGGCGAAT CGTTAACGCT TCTGCCCCCG ACGGACCGGC
CTCTTATCCC TGGGACGAAC TTCCCTTTGA ATATGTTCTC ACCGGCACCA AGATTCGTCT
CGAGCATGTC ACGACCGAAA AGCGCCTTCA CTCCCACGAC ATTCGACCGC CTGTCAGCGA
GGTTGATTTC CAAAATGAAG TTTCTGGCTA CGGTTTCCCC GGCTTTGCTG GTGATGCCAA
TGATGATTTC ATTGTGGAAA TCACCAAGCG CACAAGAGGA AAGAATGATA AGCAAGCTAA
ACACAGGCTC AAGACTCTCC GCAGCGAGTT TAGGCTGAGG CACGCTTTGT CTGGATGCTA
CTTGTTCTCG CACAAAGTCA AATTGCCTGA CTGGGGTTAC GAACAGCAAG AGGTGACTTG
TAACAAGAAC CCTACTTGGG AAAACTCTTT GTGGTACATT GAGACCAATC AGCATGTTCA
ATGTGAGTCG TCAATACGTC CATTCGGGAC TTTCCTGACG TATCATTGCA GTGCCCATCG
ACGCTGAGCG AGTTAATTAT GAGAAACCCA GCTTCTTTGA AAAGTTTTTC GAGCTCAACG
CTGTTATGTG GAGGACCAAC GCCGGTTTGA CTGAGAGACA TGCTTATGAC TCTCGACCTC
AACATTGGCC TTGGCTCAGG CGTGGTATTG TAAGTTGCTT GATCATTTTA ATGACCACAT
AGCAGCGTCC TAATAGGTAC GCAGAACTTC TGGGTCAAGG ACCACAGGCA AGTTTACCTC
ATCGGTAACC CCGTGGTATG GTGGTCTAGT ACTGCCGCTA TCGTTGCTTA TCTCGCCGTG
AGAGGGTTCT TGGTTTTACG CGCCCAGAGG GGTTACAGAG ACTTGCATCA ACGTGAGTAT
GACATTCCTC CTCGCTCTTC GGCCCTCCCC TCAGCAGAAT TCCGCTAAGT CTATGCACAG
CCAAGCTCGC ATTTTACGAC GATATTTGTG CTTTCTGCGT CATCGGCTGG GCACTCCATT
ATTTCCCCTT CTATCTTATG CAACGTCAGC TTTTCTTGCA CCATTACCTT CCCGCACTTT
ACTTTGCCAT CCTTCTTTTC TGCACCGTCT TCGACTATGC CACATCTGCG CTCAAACCAA
AGATTAGGAC AAACATTGCT ATTGTGATTT TGATCCTTGC ACTTTGGAGC TGGAACCATT
GGAGTAGCTT GGCGTATGCT GGGGAGTGGA CTAAGGGCGC TTGTGAGAAT GGCAAGTGGT
TGAGGACCTG GGATTTCTCT TGGTACGTTT CCATACGCCA TACCCATATA CACATGAAAC
CCACTGCTAA TAATCTTGTG AAAATGCAGT AACGACTTTT ACGAAAACAC TAGCATGTAC
AACTCCCAAT CCGCCATTTC CAGCGAAAAA ATCGCTCCTA CCGATCTCGG CCCCGACTCA
GCCACCACTA CACTCATCGA AGAAGTTCCA GAACCTATCC AAAACGTCTT CCAGCAAGAT
CCCCCTCCTG AGGAAAAGAC AGTTGCACCC GTGGGCCCCG CGCCGGAAGT TCAGATGGAA
GAGTCTTCAG CGGTTTTCAT TCCTAAGGGA GAAGAGGCGC CACTCGCTGA GGATCTGAGA
GCGCCAGTAG GAAATGATGC GGGTGATCCG GCGGTGACGG ATGGGGAGGA TGACGGTGGT
TGGCACGGAG GCGCAGAGGA GGGACAACAT CGACAAGAAA AGGACGAAGT GAAGATAAAG
GAAGGTAAGG CGCCTGTGGG TGCCAAGGTT GACATTCCTG ATATGGGATT GGATGAGGAA
CAAAAGTTGT TGGTAGATCA AATTATGGAT GAGCAGGAAT AAGCTAGAGA CGCCATTATT
TGATGCAGAG TCCGTGAATG TCTTGTCCGA AGATTGCTTA C
|
|---|
| Protein sequence | MSQPLTRRGP LQPHPSQAST FTSKVTVESE ADARLRDHHS GRTAQKTAFG GKRGSAAVGR
IGKREWTMIG GMVVVALYVR LYKLGRPSSV VFDEVHFGGF AMKYIRRKFF MDVHPPLAKL
LVTLSAWIGG FDGKFDFKDI GKDYLEPGVP YITMRFFPAA LGIALIPLAF LTLLALRLSH
TSALLGALLV TFDNALITQS RLILLDSFLV FFTGLTTLFW VRFSNDDSEG RAFTKPWWIN
LLCTGLSLGA VVSCKWVGLF TIAMIGVGTL RQLWLLLGNL KVTPRQYIRH FAARTLCLIV
VPLTFYMLMF RIHFWILNES GDGDGFMSSE FQHTLQGHGM ADTFADVGFG SKVSIRHVNT
QGGYLHSHPH PYPGGSKQQQ ITLYPHRDDN NVWRIVNASA PDGPASYPWD ELPFEYVLTG
TKIRLEHVTT EKRLHSHDIR PPVSEVDFQN EVSGYGFPGF AGDANDDFIV EITKRTRGKN
DKQAKHRLKT LRSEFRLRHA LSGCYLFSHK VKLPDWGYEQ QEVTCNKNPT WENSLWYIET
NQHVQLPIDA ERVNYEKPSF FEKFFELNAV MWRTNAGLTE RHAYDSRPQH WPWLRRGINF
WVKDHRQVYL IGNPVVWWSS TAAIVAYLAV RGFLVLRAQR GYRDLHQPKL AFYDDICAFC
VIGWALHYFP FYLMQRQLFL HHYLPALYFA ILLFCTVFDY ATSALKPKIR TNIAIVILIL
ALWSWNHWSS LAYAGEWTKG ACENGKWLRT WDFSCNDFYE NTSMYNSQSA ISSEKIAPTD
LGPDSATTTL IEEVPEPIQN VFQQDPPPEE KTVAPVGPAP EVQMEESSAV FIPKGEEAPL
AEDLRAPVGN DAGDPAVTDG EDDGGWHGGA EEGQHRQEKD EVKIKEGKAP VGAKVDIPDM
GLDEEQKLLV DQIMDEQE
|
|---|
| |