| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND05540 |
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| Symbol | |
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| ID | 3257394 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | + |
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| Start bp | 1499471 |
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| End bp | 1501391 |
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| Gene Length | 1921 bp |
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| Protein Length | 533 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | 638256492 |
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| Product | negative regulation of transcription from Pol III promoter-related protein, putative |
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| Protein accession | XP_570140 |
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| Protein GI | 58265968 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5046] Protein involved in Mod5 protein sorting |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000253774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACC TCGACTACCC CCTCCTCACG CAGCTCTCAG ACTCGCTCTC CTCAGACACC
TCCTCCGACC TCCGCGTCCA TGCCAGGTTC GAGGCGTACA GCGTGAAACC CGTCGGCAAG
GAGAAACGTG CATTCAAGGA GCGAGAAGAG GCCTACATGA GCGAGCAGGA AGGCATGGAT
GAGTCCGTCT CGCCTCTGGG CAACCTGCGC AGCTGCTGAC TACCACAGAA TGAGCTTTTC
TCCCGAGATG AGAGAGGCTG GTCTCGCCTC ATGCTTTGGC CGACTCGACG AGAAGGAGTC
TCGGTACGTT CCGATGCCAA GCCGCAGCGA TATCCGAACT GTCTAACGTC TCGAGCAGCA
AAGTGCACTT TCTCCTGGTC TCCACACTCA ACTCGGCCTT CCCGGACCAT GACTTTTCCT
CCCTGCGGCC AGACCATTTC ACGAGGGAGC ACTCGGCCTC CCAAGTCTTG GCGTATCTCA
GCGGAAGTCT GCTTGGTCCA GCCGGCACAG GCTCTGCCCC GTGAGCGTCT CACTCTGCCG
CGCTCTATGG ATTGACTGAC CTCAGTTCTC CCCAAAGAAT CTTCTTGGCT CCAATGTCTC
TCCATTCCCG CTCTCCGCAA TCTTCACCCT CCTTGCACCC CCATTCTTTC TCCCACTCGC
CTACCCTTTA TAATCCATCA TCTTTCGACT TGTCTTCCGG CTCCCTTCCG TCCCTCTCGA
ACCTCGACGA TATTAACCTG TACCGCGCAT TGAATCAAGT CATTTCGATG GATGATTCGG
ATGTCTATTC ATGGTTCCCT GAGCCGGAAT ACGACCCTCA TATGGACTCG ATCGAGGACG
GGGACCGAGA GGACTACATT GAGGAAGAGG AAGAAGGGAT GGACGTGGAA GACGAGAACA
GCGGTGACAG AAGTGATACA TGGGGCACTG GAATGGATTT GGATATGGAA ATGGAGATTG
AAGGAGAAGA CAGACGGAAT TCCGGCCGGC AACCCGTCTC AGACGTATGG GAAGCACCTG
AAAGACGTGT CGGTGGTCTG TTATGGAGTG CCAACTACTT TTTTTATAAC AAGTGCGTCC
ATATCATCCG TGTGCCCTTT GCTCTTCCTA GCTGACCCCT TACACCCCAT TCAGGAGGCA
AAAACGAATA TTATTTCTTA CATGCTGGTG TCGTCACGTA CCTCCTTCCC CTTCCCGCCC
TTTAATCAAC GACTTGGTGG ATGGCCAGAC TCCTGCGCTT CCTCTTCCAA TAACGGCCTC
ATTCTCACCT TCTTCTCTGG AACAATCCGT TCCTCATCCA CCAATCGTTT CCGGTCGCCG
ACATTCGGGC CGTAAGGCCC GCCATCCCCC TCCTCTCCGA CACAAGCCTA CCCTCGTCAG
TAATATGCCT AGTACAAGCA ATAGGGGGGA CGACACTTCC TCCACTATTC CCATCCGTGG
CCTCTCCCGC CCGCCTGCTA ACCCAAATAC CCAGCCCAGC GCTCATGCCC ACTCGCCCGC
AACCCCACGG TCAGATAAAC TCACCGCCTC TGTCCCTGGG CCTTCTGGAT TTGGTTTCAC
CGCTCTGGGC GGCGTTGGGC AGGGACAGCA GAGCCCAATG GCAAGGATGC GAGTCGGGGG
TTTCAAGCCT CGACAGACAC CCGCAAGGAT GGTTATCAAT GCTCGAGCTG CCGAAGCGAC
TAGCCAGCCT TCTTCTCGGC TTCAGGCGGC TCGGGATAAA AACCAGGAAG GCGAAGGCGA
GAAACGGGGA AGAAGTGAGA GTACTACCCC TGGACCGTCT TCGGTCGGCG GAAGCGGCGG
CGGTGGTGGC GGAGGGGGAG GGGGAGGTGC GAGTGCTCTG ACTGCAGGGA TGAGGGCCGC
GGGAAGTGCC ACTGGAAGCG CGGGGTCAGA GACTGGGGAA AAGAAACGAG TAAAAGTCTA
A
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| Protein sequence | MKYLDYPLLT QLSDSLSSDT SSDLRVHARF EAYSVKPVGK EKRAFKEREE AYMSEQEGMD
EMSFSPEMRE AGLASCFGRL DEKESRKVHF LLVSTLNSAF PDHDFSSLRP DHFTREHSAS
QVLAYLSGSL LGPAGTGSAP IFLAPMSLHS RSPQSSPSLH PHSFSHSPTL YNPSSFDLSS
GSLPSLSNLD DINLYRALNQ VISMDDSDVY SWFPEPEYDP HMDSIEDGDR EDYIEEEEEG
MDVEDENSGD RSDTWGTGMD LDMEMEIEGE DRRNSGRQPV SDVWEAPERR VGGLLWSANY
FFYNKRQKRI LFLTCWCRHV PPSPSRPLIN DLVDGQTPAL PLPITASFSP SSLEQSVPHP
PIVSGRRHSG RKARHPPPLR HKPTLPSAHA HSPATPRSDK LTASVPGPSG FGFTALGGVG
QGQQSPMARM RVGGFKPRQT PARMVINARA AEATSQPSSR LQAARDKNQE GEGEKRGRSE
STTPGPSSVG GSGGGGGGGG GGGASALTAG MRAAGSATGS AGSETGEKKR VKV
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