| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND03540 |
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| Symbol | |
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| ID | 3256971 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | - |
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| Start bp | 970274 |
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| End bp | 974501 |
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| Gene Length | 4228 bp |
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| Protein Length | 1193 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638256287 |
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| Product | DNA-dependent RNA polymerase II RPB140, putative |
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| Protein accession | XP_570204 |
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| Protein GI | 58266096 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.85133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTCTTTCCT CTTCCAGCTT TACTGCGTCC TGCGCAACCA CCTCAAGCTC ACGCAGACAC
CCAAAATGGA TGCAGGTGAA TACCATTCCT TTACATGCAC ACGTATACAC CGCTACAACC
GTCTTGACTC CTAGCAGACG ACTATCCGCT TGCATCCCAG CCCCTCGACG ATGGCTTCAC
TTACGATCCC GATTACGACT ACTCTCAGCA GACGGCCCCA AAGGGCGACG AGGACGAAGA
AAAGTACGAT GTTGACGAGG ATGAGCCGAT CAGCCAGGAG GACTACTGGA CTGTTATCAA
TTCGTTCTTT GAGGAAAAAG GTCTTGTTCG TCAACAGCTC GAATCTTTCA ATGAGTTCAT
CGAAAACACC ATGCAAGAGA TCGTCGACGA TCATTCGAGG TTAACTTTGG ATCAATTTAC
ACAGTATACA GGCGTTGCAG GTGACGAAAC AGTGAGTTGG CTTCATTGTC TGTTGATATT
GACATGCTGA TAAGCCCTAC AGAGACGTTA CGAAATTTCC TTTGGCCAGA TCTATTTGGC
TCGGGTCAAT CATACGGAGA TGGATGGTAG AACTAATATG TTGTTCCCGC AAGAAGCGCG
TCTCAGAAAC TTGACTTACT CGGCGCCTCT GTATGTTGAC ATCAAAAAGA GGACTTTGAC
AGCATCCGGC GTTGATGATC CTGTGGAAGC TGATTGGCAG CCTGCCGTGG GCGATGATGG
TGAGGTGGAA GGTGCTGAGG AAGAAAAAAC ATCAATCGGC AAAGTGCCTG TCATGGTCCG
CTCCAACTTT TGCCTCCTGC ATGGTCTTCC TGACGACCAG TGTCATGAGA TTGGAGAATG
CCCTTACGAT CAAGGCGGTT ATTTTATCAT ATCTGGTTCC GAGAAGGTCT TGATTGCTCA
GGAGAGGATG GCCACAAACC ATGTTTTCGT GTTCCTAAAG GCAGCCCCTG CGAGATTCAC
CTATTTTGCG GAAATCAACT CTCAAAAAGA AAAAGGTGGA CGGGTGGCGA ATCATACAGA
AGTCAGAATG TACGCAAGGG CATCCGGAAC AACTGGTGGC GTCATTCGCG TATCTCTTCC
CTACACCAAA GTTGACATCC CCCTCGTTGT GGTCTTTCGA GCTTTGGGTA TTGTTCCCGA
TAGAGACGTT CTCAGCCACA TCTGCTTTGG CGCCGAAGAT GAAGCCCTTC TTGAAATGCT
TCAACCCAGC ATTGAAGAAT CTTTTGCTGT CCAAGACCGT GACACTGCCC TCGACTTCAT
TGGTCGCCGT GGTCAACATG AAAAGGCCCC TCGAGCTCAG CGACAGCGTG CGGCCTTTGA
TATCCTTCAT AAAGAGTTTT TGCCCCACGT GTCTACCGCC GAAGGATTTG AGTCGAAAAA
AGCGTACTTC CTGGGCTACA TGGTGCATAG GTTATGTATG GCGGCATTAG GAAGAAAGGA
GTTGGATGAC AGAGATCATT TTGGGAACAA AAGGTTGGAT CTTGCTGGAC CGCTGATGGC
GGAGATGTTC AATGTTGTGT TTGGGAAATT GAGGGAAGAC ATGTACAGAT ATCTGAAGAA
GGCAAGTTGA GCGTAAAGTA ATGGAATTAA AGCTAACTTC CGGCAGTGCG TCGAACAAAA
CAAGGAGTTT GCCCTTAACA TGGCTATTCG CCCTAACACG ATTACCGACG GTCTCAAATA
CGCTCTTGCT ACAGGCAACT GGGGCAAGCG AGACAATACT CGAGCAGGTG TATCACAGGT
TCTCAACAGA TATACTTTTG CTTCTACCCT CTCCCATTTG CGGCGTACTA ATACGCCCAT
TGGACGTGAT TCAAAAGCTG CTAAGCCACG TCAACTTCAC AACACCCATT GGGGTATGGT
TTGTCCGGCT GAGACGCCTG AAGGTTCCGC ATGTGGTCTG GTCAAAAATC TCGCGCTCAT
GTCTTACATT TCGGTTGGGT CCTATTCCGC TCCAGTCATG GAATTTTTGG AAGAATGGGG
TCTGGAAGAT CTTTCAGAAT ATCAAGATGC GCCCACTGCG ACGAAAGTGT TTGTCAATGG
TGTCTGGATG GGTATTCATC GAGACGCACC CACCTTGCAC AACAACCTGT TGCAAATGCG
TCGTGGTGGC CAGCTCAAGT ACGAAGTTAG TATCGTCCGA GACATCCGAG AGAGAGAACT
GCGCTTGTAC ACCGATGCGG GACGTGTCTG TAGACCGCTT TTCATTGTCG ACCAGCCGAC
GCAGACATTG CGCCTCAAAC GTGATCACAT TGACAGGATC GACCAGATGG CAGACGAGGG
TCTTTTGTCA GGAGCGTGGG ATAAGCTATT GTCCGAGGGT ATTGTCGAAT ATGTGGACGC
AGCTGAGGAG GAGACCATAT TAATAGCCAT GACGCCTGAA GATCTTGTGA ACGCTCGTAC
TGCACACAGC AAACATGAGC TTGTAAGGGA TAGAGCAGCC CACAATCTTG AATCCTTTGA
TCCTGCGGCT CGTATCAAGA GTACAGTGTG GAGTCAGCAG TATACCCATA TGGAGATCCA
CCCGAGTATG ATTCTTGGTG TCTGTGCTAG TATCGTTCCT TTCCCCGACC ACAACCAATC
TCCTCGAAAT ACCTATCAGT CTGCGATGGG CAAACAAGCC ATGGGTGTCT GCCTCACCAA
CTACCAGCTT CGTATGGACA CTATGGTCAA TGTACTCTAC TATCCTCAAA AACCGCTTGC
CACTACTCGT TCAATGGAGT ATCTCAAGTT CTCTGAACTT CCTGCTGGTC AAAACGCAAT
TGTTGCCATC ATGTGTTATT CTGGCTACAA TCAAGAAGAC TCCGTCATCA TGAACCAATC
TTCAATTGAC CGCGGTCTTT TCCGATCGTT GTACTTCCGT TCCTACACCG ATACTGAGAA
GATGAAGGGT ATGGTTAAGG CGGAGACGAT TGAGAAACCG GACAGAAATG AGACGTTAAG
AATGAAGCAT GGGACCGGCG ATCGGTACGC CAAGCTTGAT GTCGATGGTC TTGTTGCTCC
GGGAACAAAC GTCAACGGTG ATGACATTCT CATCGGCAAG ACTGCACCTT TGCCTGAAGA
CAGTGAGGAG CTTGGTCAAA GGACCCAACT TCACACAAAG CGAGACATAT CCACACCGCT
GAAGAGCACG GAGCAGGGCG TTGTTGACCA AGTTATGCTG AGTACCAACG GAGAAGGTAA
CATGTTTGTC AAAATTCGTG TGAGGTCCAC CAGAGTGCCC CAAATAGGTG ATAAATTTGC
CTCACGACAT GGTCAGAAAG GTACTATCGG TATCACCTAT CGACAAGAAG ACATGCCTTT
CACTGCGGAG GGTCTTGTTC CCGATATCAT CATCAATCCG CATGCTATTC CGTCACGAAT
GACTATCGGC CATTTAGTCG AATGTCTCTT ATCGAAAGTG TCAACTCTGA CTGGAGCTGA
AGGAGACGCT ACGCCCTTCA CAGAGCTGAC TGTCGAAGCT GTTTCCAAAG TTCTGCGAGC
AAAGGGGTAC CAGTCTCGCG GTTTTGAGGT ACTTTACCAT GGTCATACGG GAAGAAAACT
TCAGGCCCAG GTCTACTTTG GCCCTACGTA CTATCAGAGA CTAAAGCATA TGGTAGATGA
CAAGATTCAC GCTCGTGCGC GGGGACCGTT GCAGATTTTA ACCAGGCAGC CAGTAGAAGG
TAGAAGTAGA GATGGTGGTT TGCGGTTTGG TGAAATGGAG GTAAGTAACA TGATGATTCA
GCTTCAGGCC GCTAACACCA TTACAGAGAG ACTGCATGAT TTCGCATGGT ATCGCTGGAT
TTTTAAAAGA AAGGATGTAC GGTGAGTAAA CGAAGTTCGA GCGAATTCTG CTGTTGCGCT
GACAACTCAT TATCAAGATT CGTCCGATGC GTTCAGAATA CATGTGTGCG ACGTCTGCGG
TCTCATGGCC GTTGCCAATC TCAAAAAGCA AGAGTTCTAC TGCTCTGTTT GCAGGAACAG
TACCCAGATC TCCCAGGTGT ACATCCCGTA TGCTGCCAAA CTGTTGTTCC AAGAGGTAAA
TTTCCATCAT TGGTATCTGC ATGAATTCGC ACAACGCTAA CCGTGCCCCC ATTAGTTACA
AGCCATGAAC ATTGCATGTC GAATGTACGG GGAAACAGAT TGAAGAGATG GTTGAATACA
GCATTGAATA TAAGGGCGAC TGTCATGGAG GTGCGGGCCA TGCGTGGACG GAAACAGGGT
CTAGTCGAAG CAGCATCATT AATTATTG
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| Protein sequence | MDAADDYPLA SQPLDDGFTY DPDYDYSQQT APKGDEDEEK YDVDEDEPIS QEDYWTVINS
FFEEKGLVRQ QLESFNEFIE NTMQEIVDDH SRLTLDQFTQ YTGVAGDETR RYEISFGQIY
LARVNHTEMD GRTNMLFPQE ARLRNLTYSA PLYVDIKKRT LTASGVDDPV EADWQPAVGD
DGEVEGAEEE KTSIGKVPVM VRSNFCLLHG LPDDQCHEIG ECPYDQGGYF IISGSEKVLI
AQERMATNHV FVFLKAAPAR FTYFAEINSQ KEKGGRVANH TEVRMYARAS GTTGGVIRVS
LPYTKVDIPL VVVFRALGIV PDRDVLSHIC FGAEDEALLE MLQPSIEESF AVQDRDTALD
FIGRRGQHEK APRAQRQRAA FDILHKEFLP HVSTAEGFES KKAYFLGYMC VEQNKEFALN
MAIRPNTITD GLKYALATGN WGKRDNTRAG VSQVLNRYTF ASTLSHLRRT NTPIGRDSKA
AKPRQLHNTH WGMVCPAETP EGSACGLVKN LALMSYISVG SYSAPVMEFL EEWGLEDLSE
YQDAPTATKV FVNGVWMGIH RDAPTLHNNL LQMRRGGQLK YEVSIVRDIR ERELRLYTDA
GRVCRPLFIV DQPTQTLRLK RDHIDRIDQM ADEGLLSGAW DKLLSEGIVE YVDAAEEETI
LIAMTPEDLV NARTAHSKHE LVRDRAAHNL ESFDPAARIK STVWSQQYTH MEIHPSMILG
VCASIVPFPD HNQSPRNTYQ SAMGKQAMGV CLTNYQLRMD TMVNVLYYPQ KPLATTRSME
YLKFSELPAG QNAIVAIMCY SGYNQEDSVI MNQSSIDRGL FRSLYFRSYT DTEKMKGMVK
AETIEKPDRN ETLRMKHGTG DRYAKLDVDG LVAPGTNVNG DDILIGKTAP LPEDSEELGQ
RTQLHTKRDI STPLKSTEQG VVDQVMLSTN GEGNMFVKIR VRSTRVPQIG DKFASRHGQK
GTIGITYRQE DMPFTAEGLV PDIIINPHAI PSRMTIGHLV ECLLSKVSTL TGAEGDATPF
TELTVEAVSK VLRAKGYQSR GFEVLYHGHT GRKLQAQVYF GPTYYQRLKH MVDDKIHARA
RGPLQILTRQ PVEGRSRDGG LRFGEMERDC MISHGIAGFL KERMYDSSDA FRIHVCDVCG
LMAVANLKKQ EFYCSVCRNS TQISQVYIPY AAKLLFQELQ AMNIACRMYG ETD
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