Gene CNC06660 details

Gene Information

• Locus tag: CNC06660
• ID: 3256138
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1942067
• End bp: 1944176
• Gene Length: 2110 bp
• Protein Length: 396 aa
• GC content: 46%
• IMG OID: 638255886
• Product: conserved hypothetical protein
• Protein accession: XP_569948
• Protein GI: 58265584
• COG category: [C] Energy production and conversion
• COG ID: [COG5127] Vacuolar H+-ATPase V1 sector, subunit C

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000684608
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TATTAATCCA GAATCGATCC TCCATCTCAA TAAACAACAC CAACGACTGC AACGGCAACC 
TACAGATAGA CCCAAGAGAT GCCCTCTGAT TTGTGCTATT GGCTTATATC AGCCCCTCTC 
AAGGATGGTG ATCCCGATGT CATGCTCAAC GAAGTCAGGC AGGAGATCCC GGGCGTCTTT 
GCTGCTAAAT GGGAGATACC CGAGCTCAAG GTGCGTCGTT TCGCAAAGAT GCTAGCAGAT 
TGGATGTATT AGGTAGATAG AAGTGACTAA TGATGGGAGT AACGCCACGG AATACTAGGC 
TGGAACACTA TCTTCCCTCT TAACCCTCTC TGACTCTCTC CCCAAGATTG ATTCTGCATT 
CACAACCACT GCTTCCAAAC TGCTCGACCA ACTCCGTTCA TTAGTGGATA ATGATAATGG 
CAAAATCGCA CAGCATGCGA GGGTGAATGA CCGTCCGGCG GAGGAGTATT TGATGGCTGG 
AGGGGATGGG TTCAAATGGG ATAAAGGAAG GTGGGGTGAG GGAGGCAAGG TGACGGAAGT 
CGTTGGAGCG TTAAGTAAGG TAAGTTGTGA TTGGATTTTT TGGCATGGCA TTTGGAAATG 
TGATAAATAA TGATTAAAAC TGAGGGCTGA CTGGACTTGG GGTCTGTGTG CTATTTAGGA 
GATGGCCGTT ATCGAAGCTA CGCAAAGGGA AAAGGCGCAA TCTTATAACC TTGCCAAGGG 
CGGCTTGACA ACCCTTCAAC GAAAGCAAAT GTATGTCACT GCCCTCTCTA ACAATTGCTG 
TGGCTGCCGC ACACTGATAA TGTCACAAAA GTGGTAACCT TTCTCAACGG TCATTGCTGG 
ACATTGTAAA GAAGGAGCAC CTGGTAGAAG ATAGCGAATA TCTTGAAACT CTTATCGTCG 
CCGTTCCAAA GTGAGTCTTT TCATTCAGTC CTCACACCTG TTGGGGGAGA GCGGAGGGAC 
CGTATCCGTA TCCGTGCTCT TATCTGACGA AGCGTGGCAG GAACCTCGCA AAGGACTGGT 
CCAATAAGTA TGAACGTTTG ACAAGCATGG TCGTGCCCCG CAGCTCCCAG TGAGTGTTTT 
TGTCAGGGAA AATGTTGTAA CTGCGAGACT GACGATATTG TTTCTACAAT GTTCAGACAA 
ATCGCTTCGG ATGATGAGTA TGTTTTGCAG ACTGTAACCG TATTTAAAAA GGTCCGAGAC 
GATTTTATCC ACAAGTGTCG AGAAAACAAG CAAGTTTTTT CTTTCTCTAT CCCTTCAGTG 
AATAAAGGGG ACACATAGAC TAATGTTAGG TGACAGATTT ATTGTTAGAG ACTTTACTTG 
GGACGATTCG GCACTTGAGA AGCAAAGGAG GCAGCTTGCA GAGCTGGAGA TAGAGGAGAA 
GGAGTTATGG GTGAGTATGC CTTCTTTCTC CTCCCCATCC CTCCCGCCTC CTCAAAAAGA 
GGAAAACGTC ATTTGGGTCC CCATCTGACA CACTTGGGTC GTAGACTGGG CTGTTACGCT 
TGACAAGAAT AAACTTTTCA GAGGCCTATC AAATCCTTGC ACACCTCAAG ACAGTCCGTC 
TCTTTGTTGA GAGTGTACTC CGGTACGGTT TACCTGCAGA CTACGCCGGT GTCATCATCA 
AAGTACGTCT CCTTCCGTGC TTCTACTCGT ATTCCTTGCT AAAAACGGTT ACTAACCCTT 
TTCTTTCTTT CTTGCCCTAC TTCTCTCATT CTCGTTTCCT CCGCCTCCGT AGCCCGATCG 
CAAAACGGCA GCGAAAACTC TCCGATCCAT AACAACCCAT TACGCTTACC TCAACAATTC 
TTCTCGCGAC TCTTCTGCCC GGAAGGGTAA AGGAAAAGGC TCCTCATCAG CAATGGGAGA 
TGATGTCGGT GGAGAGTGGG CGAGTGTGAT GGAGGCAGAG TATTATGATA TCGTGTTGTT 
TGAGATTCCT ATGGTTATTT GCTAAAGATC AAAGAGATTA AAAGAATGAT ACATTTCTTT 
TTTCTTTTTT TTTTGATGTA AATCCCGTTG TGTTTTATCG ATGGATGATG GCTTTGATAG 
ACAGTGGAGA TGGGCCGTTG CGAGCTCTAA GCAAGACACC TCTTTTATTA CCACTGTTAT 
TACTCTGTAT 

 

Protein sequence

MPSDLCYWLI SAPLKDGDPD VMLNEVRQEI PGVFAAKWEI PELKAGTLSS LLTLSDSLPK 
IDSAFTTTAS KLLDQLRSLV DNDNGKIAQH ARVNDRPAEE YLMAGGDGFK WDKGRWGEGG 
KVTEVVGALS KEMAVIEATQ REKAQSYNLA KGGLTTLQRK QIGNLSQRSL LDIVKKEHLV 
EDSEYLETLI VAVPKNLAKD WSNKYERLTS MVVPRSSQQI ASDDEYVLQT VTVFKKVRDD 
FIHKCRENKF IVRDFTWDDS ALEKQRRQLA ELEIEEKELW TGLLRLTRIN FSEAYQILAH 
LKTVRLFVES VLRYGLPADY AGVIIKPDRK TAAKTLRSIT THYAYLNNSS RDSSARKGKG 
KGSSSAMGDD VGGEWASVME AEYYDIVLFE IPMVIC