| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC05500 |
|---|
| Symbol | |
|---|
| ID | 3256394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1639563 |
|---|
| End bp | 1644668 |
|---|
| Gene Length | 5106 bp |
|---|
| Protein Length | 1344 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638255768 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_569752 |
|---|
| Protein GI | 58265192 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0387] Ca2+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCC CCACTCGCTC TCGCAGTCAA AGCCTCAACG ACGACTCTTC TTCTCCCTCC
TCCCCTACAC CGACTATTCG CAATACTACA CCTGCCCGGC CGCCCACCGC CTCGCAGGTT
TTCGCCGCCG CGGTGGCCGC TTCCCCTGGA CCCGCCCCTG GACGCGCGGC AAGTCAGCCA
GGAATGGATA GAAGACAAAG TGGGCAGCAG CAGCAGCAAG AGCTCGGAAA GGGACGTCCT
GGAAGAGATG ATCCGGTAAG TGAAGGTGGC CAAGGGGTTG TCGCGTGAAT GGTACCACGA
TGTTTCGGAA TTTGGAGCAG GAACGTGTGT TTGCGCACAG ACGCCGCCGG GTAGACGCAC
TTCTGATCGA TTTCCGTTTG TGATCCATCA TTCTGTATTT CAGATGGCGT AATCCTCCTT
GCTATTCCTT TCTCCACCTT CGTCTCCGTC ATCTCGATAA AGGGCGCCGC TGACGATCAC
CATGACTTCA CCACAGCGCA CAGCGGCCAC ACCCAGTCAA CTCCGAGGCA ACTACTCTCC
AGCACGTGCC TCTATATCCT CCACAGAGGA TGAAGACTAC CTAAAGCCAA ACTCTCCACC
GCGGACGGCT GTTCCAGGGA ACACCACCTT TGAATCCACT CCTAGAGGCT GGGGCGGTGG
CAGTAGTCGT GGTGTACCGC AGACAGCTTT TGGAAGCAGT TTTGGCTCCC CAACTGCATT
CTTCAGTCAG CCCGCGCGAG AAGCATCTAG CGGAGGAACA CATCGCGTAG GCCGCGGTGC
CCGGTTCGCC AATTCTCGGG ACCCATCGCA AACCGTTACT AATCCGGGCG GCTCATCTTC
TCGTTCGGCT TCTCGAGCCC GTCCGCCTTT GCAGCACCAC CACAGCATCT TGAGGGATTC
TCCCAACTTG GATGATGATG AACTGCAAGA CCGAGGGGCT GAACTTATCA AACAGCGGCA
GAGAGAAAGG AAGGCAAAGA GGAAGAAGTT GGAGCTTGAG CAGCAGCGCC GACTTGCTGA
GGAAGGAACG ACTCTAGAGA CAAGTAACCC GCCCAGTGGT GTTCCAGGAG AAGGTTTTGT
CGCTCAGCAA GGGGGATTGA GCAGGGGACC GGTGCCCACG TCAAGGATAA GGAACCCTAG
TGCAACCCGC CGCCCTACAA GTGAAGGAAA CTTCCCATAC CCTCCAAGCG TATCTGATGG
AGAAACGCCC CGAGATGGCG GGATGAGCCC AAAAGAGGAT GCACGCGCAC CGTCTGTATA
TTCGTCTGCT GCCGATGAGG AGGCAGAAGA ACAGTTAGAC GAGCGTGTAA GTATAGTGGG
AGAAATTGTT AATGATGTTG TTGAAGAAGA GACGGGCGGC GATGTTGATA AGTGTGACTC
TGACGAAGGA GAGGAGAGTG GGCAGGATGA AGGAGTTACA ATGAAAGACC GTCAAGATGT
GAGTGGATTC TAATGTCTTT TATATGTCAT TTGCTCATAT ATACTAGGCA ATCAACATCG
AACATCCGTT CGGTCTTCCA ATTTGGAAAC CCGCTCTTTA TCGCAAATCA CGATCTGTAA
CTCGCAACGC CGAATCCGCG CTTCACTCAA TTCCGTCTGC TGCCGCTGAA CGGCATCTAC
TACCGGGAAA CATCCTTTGG ACAGCTCTCT TTGGATGGTG GCTTGCTATT GCATGCTTCA
TGGCAGCCGT TCTGGTAACC GGTGCGGAAG CATTAGGCTG TGGTAGAGGT GGTTATGGCA
AGACGTTACG GGGCCTAGCT TGGTATATCG GGTGGCCATT CGGAAAATAT GTGGAAGGTG
AAGGGGCGCC GGATGATGAT CATGAACACG ATGAACACGT AGTAGGGGAC GAGGAGCAAG
CGAATGGGAA TTACCAAGCA CTTGATGGGG CTTCGCCGAT CAGTAAACGA CAAAGAGCGA
GAGAAGTATC CGACTCCTCG TCTTCAAATG TCACCGTCAG GCATGCTCAA GATTCGGCAC
CAGTCAATGC CCCAGACTCC CCCGACGCAA CTTCAGCGAG TACTATGCGA GCCAACAACG
AACGTCATGC AGTGTCGTTC GCTTCTGGTG TCAAGGGCAA AGGCCGCGAC AGTGTCACCG
AACGATCTTC ACTGTTGGGA AAGAACGGTT TCAGGAGGCC TAAAAACAAG CGAGCCAAAA
AGCTCGGCCA ATTATTCTAC TGGCCTGGAT TCTGCCTCAT TGTTGCACCT ACAATGCTTT
TGGTCTGTAT TCTTTGCTGG GGATTCGTGA TAACCATTCC CATGGCAAAG TTGACTTGGG
AATTGCTGAA CCTCTTATGG TACCGACCAC TTGAGATCAA TTTCCGACCT GCTCCCAAAG
TCCCCGTACC AACACCCGCC AGTTCTTCTG ACAACGTACA CGATGATACC AACGGTTCCG
GGTCGAGCAC TGCTGTCGGA GACTCCCCAA CCAACTTCAC TCTCAAGCGC GCTCGTCTTA
CGGCGGGTCA AGTTGCCCCG ACGTCTGGAC CTACATCCAC TGTATTGCTC TGCACCTACC
GTGCAGTTGG CTTACAGTAC TACAAGTACA CAGTTGGTGG GGTCAATATC ATGTTTATCA
ACCTCTTGCC TCTTGTGTTC TTTACTATCA TTGATGGTCT CCTCCTTCTT CCAGCCGTGG
AACGCAAAGA GCACCTTGGG CGACCCATCG CTCCACTCTT GCGTCTCCTC ACATCTCAAG
CCCTCCTCTT CGTCCTGGCA CTTGCTTCAG TCATCCCGCT CTCATACTTC ATTGGCATGG
CTGTCGCTTC CATCTCTGCG CAGTCCTCCA TCGGCATGGG CGCTGTTATT AATGCTACCT
TTGGTTCTAT CATCGAAATT ATTCTCTATA GCATTGCCCT CACGCAAGGC AAAGGCAGGT
TGGTGGAAGG TTCTATTGTA GGCAGTATCT TGGCCGGTGT ATTGCTCATG CCGGGAGCGA
GTATGTGTTC AGGGGCTTTC AAAAGGAAAG AACAAAAGTT TAACGCGAAG AGTGCCGGCG
TGACGAGTAC GATGTTGATC ATGGCTATCA TCGGGACTTT GACACCGACC ATGTTCTATC
AGACCTATGG TTCTGTGAGT TGTTCTATTG ATTTACCTAC ATTTGTATAC AGAGAGCTGA
TAAGCACCTT AGTTTGAGCT TCATTGCCAA GACTGCCCTT CAGGTCACCC CAACAGAACC
ATCACCTTGC CAGAGGGGGG GATGAGTTTA GAGCCTGGAG ACATGTGGAT GTGCGACCAT
TGCTACTATG AGCATCCTGA TCCAGAGCGT GATCCATTCT ACCAGGAAAA TGTCAAGACT
TTAATGTATG CCTGTGCTGC CATCCTTCTC TTCGTAAGTC AATCACAGTC CATGAATCGT
GTTTTCAAAA AAATTGACAT ATATGGTCTA GTCATATCTT ATTGGTCTCT GGTTTTCTCT
CCGCACTCAC GCTGCCCAGA TATGGCAAAA TCCGCAACAG CTCATGAAGT CTGAGGAGGC
TCAAGCTGTT AGTGAAGTGC ATCCTGCTCT CAAGAGTACC CTTGCGCAAC GCATTACCCC
ACAGGCTCTG ATGCAGCATG TCCTCCCTTT GCACAAATCA AACAACCCCC CTGCCACCTC
ATCCGCAAAT CCTGTTATAC CTCCTGTTGT ACCTGTAGCC ACCAACGAAG GTAGTGTCCC
CGCGACAGTG TCTCCCAAGA CTGGCACGTT GCGCTTGGCG CCATCTGGCT TGACTAAAGA
CGGAGCTGAT CACACTGCCA ACATCACCCC AGGACATTCT CAGCAATCCT CTCATGCTGA
TGGAATTGAA ACTTCTCGTC CGAGTCCCAG TACCAGCCAA GCCTTCACCC TCCCCGCTGG
GTATACCCCG TATCTTGAGA GCATTGATCA AGTTACAAAG TCGAATCTCA CCCCCATGCG
TCTTCCTGGT ACACTCACAA CGGAGGACTT TACTCGTGCT GTGGCGGTTG CTACCGTTAG
TGCTCTCAGG CATCAAGGGT CAATTGTTGA GTCTGAAAGG AAGCGTAGAC ACGTGGTGGG
TGAAGGTCCA GTGGGCGTGG AGCAGGGAGG GGGGGTAAGT AAAGAGGAAG AAGGGCATGA
AAAAGGTGGT GGACATGAAG CGCCAAGCTG GACCAGAGGC GTCAGTGCTG GGGTTTTGCT
GGGTTGTACC ATGTTGTACG CTATTATTGC TGGTGAGTTA TACTGTGAAA TGTAGTTGAC
GAAGGGATTC TGACGATTAT CTGCAGAGAT CTTGGTGGAC GTGGTAGACG TTGTGCTCCA
TGGATCCGGT ATAGACGAAA AGTTTTTAGG TTTGACACTT TTTGCGCTAG TGCCCAACAC
GACAGAGTTC ATGAACGCCA TGTCATTTGC TCTCAATGGT AACATTGCTC TCAGGTCAGT
TTATGACTTG CGGGATCAAC CATTGCGCAG AAATACTAAT GGTAATGATA GTATGGAAAT
CGGTTCCGCG TATGCTTTAC AAGTGTGCCT GCTCCAAATA CCGGCAATGG TGGCTTTCAG
CGCATTGTAT CAGCCGGAGA AGATGGGCGA TGTCATCGAT ACATTCACGT AGGTCCAACC
CCTCAGTTCA CATAGCGTGC GGTATTAACG ATCGCTAAAG CCTCATTTTC CCTCGTTGGG
ATGTGATCGC CATTATCCTT TCTATCTTCC TGCTCACTTA CACCTATATC GAGGCAAGAA
GTAACTACCA TCGTGGCTCA ATTTTGGTCC TTGCGTAGGT TTTTCACTCT AGTCAGTTAC
AATACCCGTC ATTGACCGTC GTTATAGCTA TATTGTACTC ATCATGGGGT TCTACTACGC
TCCTCCAAGG GCTCAAGACG ATACCGACCA TGACACCATC TTTGGACAGG AGAGTCTGGA
AAGCTTTAAC GCGGGCTGGA CAACGGCATT GACGAAACTT TGGGTGTGAT AAGCCTGTCG
ATGGATGTGA TATGGAGACA GATGCAGTAT GTGTGGAGAG ATGAGAAGAT TGTCGCCAAG
TAGTGTGGAG ATGCGGAACT GTCTTCTTGT GTAATATATA CGCTTCATAT AGACCGATCA
ATGATACATA CGTATCTTAT TTGATAGTAC CAATTTATAC AGTAATCGAT AACGAAATAA
TCACGA
|
|---|
| Protein sequence | MSTPTRSRSQ SLNDDSSSPS SPTPTIRNTT PARPPTASQV FAAAVAASPG PAPGRAASQP
GMDRRQSGQQ QQQELGKGRP GRDDPRTAAT PSQLRGNYSP ARASISSTED EDYLKPNSPP
RTAVPGNTTF ESTPRGWGGG SSRGVPQTAF GSSFGSPTAF FSQPAREASS GGTHRVGRGA
RFANSRDPSQ TVTNPGGSSS RSASRARPPL QHHHSILRDS PNLDDDELQD RGAELIKQRQ
RERKAKRKKL ELEQQRRLAE EGTTLETSNP PSGVPGEGFV AQQGGLSRGP VPTSRIRNPS
ATRRPTSEGN FPYPPSVSDG ETPRDGGMSP KEDARAPSVY SSAADEEAEE QLDERVSIVG
EIVNDVVEEE TGGDVDKCDS DEGEESGQDE GVTMKDRQDA INIEHPFGLP IWKPALYRKS
RSVTRNAESA LHSIPSAAAE RHLLPGNILW TALFGWWLAI ACFMAAVLVT GAEALGCGRG
GYGKTLRGLA WYIGWPFGKY VEGEGAPDDD HEHDEHVVGD EEQANGNYQA LDGASPISKR
QRAREVSDSS SSNVTVRHAQ DSAPVNAPDS PDATSASTMR ANNERHAVSF ASGVKGKGRD
SVTERSSLLG KNGFRRPKNK RAKKLGQLFY WPGFCLIVAP TMLLVCILCW GFVITIPMAK
LTWELLNLLW YRPLEINFRP APKVPVPTPA SSSDNVHDDT NGSGSSTAVG DSPTNFTLKR
ARLTAGQVAP TSGPTSTVLL CTYRAVGLQY YKYTVGGVNI MFINLLPLVF FTIIDGLLLL
PAVERKEHLG RPIAPLLRLL TSQALLFVLA LASVIPLSYF IGMAVASISA QSSIGMGAVI
NATFGSIIEI ILYSIALTQG KGRLVEGSIV GSILAGVLLM PGASMCSGAF KRKEQKFNAK
SAGVTSTMLI MAIIGTLTPT MFYQTYGSFE LHCQDCPSGH PNRTITLPEG GMSLEPGDMW
MCDHCYYEHP DPERDPFYQE NVKTLMYACA AILLFSYLIG LWFSLRTHAA QIWQNPQQLM
KSEEAQAVSE VHPALKSTLA QRITPQALMQ HVLPLHKSNN PPATSSANPV IPPVVPVATN
EGSVPATVSP KTGTLRLAPS GLTKDGADHT ANITPGHSQQ SSHADGIETS RPSPSTSQAF
TLPAGYTPYL ESIDQVTKSN LTPMRLPGTL TTEDFTRAVA VATVSALRHQ GSIVESERKR
RHVVGEGPVG VEQGGGVSKE EEGHEKGGGH EAPSWTRGVS AGVLLGCTML YAIIAEILVD
VVDVVLHGSG IDEKFLGLTL FALVPNTTEF MNAMSFALNG NIALSMEIGS AYALQVCLLQ
IPAMVAFSAL YQPEKMGDVI DTFT
|
|---|
| |