| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC04890 |
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| Symbol | |
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| ID | 3256594 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 1477714 |
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| End bp | 1480108 |
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| Gene Length | 2395 bp |
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| Protein Length | 527 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638255708 |
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| Product | ornithine decarboxylase, putative |
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| Protein accession | XP_569775 |
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| Protein GI | 58265238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.447794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGGGGGAGAT CCAACAACAA ATCACAGCCG CATTCTTTCT CTCACCTTCC GACTGTAGGT
TTTCCTTGCT TGGTCTCTCA AAAGGCATTC AACCTTAAGC CGTCGTACCC ATCCCTCTCT
CGCGTAGCAC GTGTGACCCC GACACGCCGC TCCCTGACTG TGAGTAACTC AAATTCCGCG
CATCCAAATC CGAGGGCATT GATTGGTGGT GGCGGAGGGA GGATACAGCT AGAGAAAAGT
GAGAGCGAAA GAAGGGGACA TGGGGGAAAT TGAAGAAGTT AACCAGTTTC GCGAAGCTGA
CGGTAGATAT TAACAGGTGG CATAGATATC CTCGGGACGA CGGACTACCG CCATCCCCTC
GTTTCGCCGC ACCCCATCGC CAACGCAATG TCTAGCACCA TCATTCAAGA CTACATGGCT
CCGGCTGCTC CTGTTTCTAC TCGACAGTCA TCATGGGCCG AGCAACAAAC TCTTCAGTCT
CGCTCCACTG TTTCGAATCT GATTAAAACA CTCGACCCTG CAACACAAAT TCCTTACGTC
CCCGAAGTCG CGCTTCCGAC CCCTCCGGCC ACCACTACTC ACAGCATCAT CTCCAACGAT
GAAGAGCATC CCGCGCTTGC GCCCGTTGTT GATATCCCGG TTCACCAACT GGTTCAACAG
ACTATCGCTG CCAGCACCGG TGTCGACATC GACGAGTCGG CTTTCTTTGC TGCCGATTTG
AGCGCCGTTT ACCAAGCCGT GCAAATGTGG CGCGCATCCC CGATTGGGTC TCGTGTGGAG
ATTTTCTATG CGGTCAAATG TAACCCTTCG CCTGCCGTCT TGCATCTGCT TTCGCTCATG
GGTACTTCTT TCGACTGCGC ATCTTCATCT GAAATCAACC AGGTTCTTTC GCTCCCTAGC
GCTCCTTCCG GGGACAGGAT TATCTTCGCC AACCCTTGCA AGCCGGCTTC TTTCATTCGC
ACCGCTGCTC AGCGTGGAGT GAGCATGATG ACTTTCGACA ACGTCGACGA GCTCTACAAG
GTCAAGCGCA TTTGCCCCAA CGCCAAGCTT GTCCTTCGTA TGCTTACAGA TGACTCCAAG
TCGCTTTGCC GCCTTGGCTT AAAGTTTGGC GCTCCTGTTG ATAGTTGCCC TGGTCTTCTC
AAGGTTGCTC GTCAGCTTGG TTTGAACGTC GTCGGCGTTT CTTTCCATGT GGGCAGCGGC
TGTAAAGATC CTATGCAGTT TGCCGATGCA GTCTGGAGGG CCCGGAAAGT TTTTGACATG
GGTAAGGAAG CTGGGTACAA TTTCGATTTG CTTGATATCG GAGGTGGTTT CGAAAGGGAG
ACTTTCGCGG AGATGACTCA GGTTTTGAAG GACAGTTTTG ACCTTTATTT CCCAGAAGAC
AGTGGGGTTA GGATTATTGC TGAGCCTGGT CGATTTTTGG TGTCGAGCGG TGAGCTGTGA
TCACAAGAAA GGGAAATTGT AATGCTAATA ATGTGAACAA GCTTTCACTT TGGCTACTTC
TATTATTGCG TCTCGTCGAG CTCCCAAGGC TGAAGCCAGT CAGCAAGTGC AGGCGGCCAC
TCAGGAGGAT ACTAAAAGTG CCGATGTGAT GTGTAGGTGT TACTATCAAA GAAGCGAAAT
GTATTTTCGG TTTAACTGAC CACATCTAAT AGACTACATC AACGATGGTG TATATGGGTC
TTTTAACTGC ATCATGTTCG ACCACCAAAT TGTGCACCCT CATCCTCTTA CTATTGGCCA
CAAGCTTGCA ATTGCAGCCC CACCCTTCCC TCCTCCTCCC AATGTCCAAC TCGAGGTCGA
TCTTCCCGTG CAAATGGGCT ACAAGGATGT CGAAAAAGTC AGTGTCTGGG GGCCTACCTG
CGACTCAATT GATTGTGTGA GGCAATTGGT TGATCTTCCC AAGGGAATGG ATGTCGGAGA
TTGGATTGGA TGGGGTGAGA TGGGGGCGTA CACTTTGTGC GCAGCCAGCA CCTTCAATGG
GTAAGCCACT GCTGGCTTTC ATCTCAAAAC GTTCTTGTAT TGATTAGTCA CACTTGTAGT
TTTGACAGGT CTCCCGTTCT CTGGACGACT GGTGGTAACA CTGAGGACGC TCGAATGGTG
CGAGCGATTC TCGACTCTTT TGCTGCGACT TCTCTCAGAT GACATCGACT ACACCCCTCG
GAAAACAAAA AGGTAGTAGT TAGTTAATCA ATTCATTTGT CATTGCCATC GTTGCAGTCC
TCGTGGTTTA TTTCGCATTT GTATATTTTT GTACCATATT CACTACAATA ATATATGTAG
GAAGTTAACA AAACATTCCC AAGTTGACGA ACAATTTTGT ATGTCGTTAT TTGGCGGAGT
GATTGTGTTA AAATGCTGTC TGAATGCACT TTTCCATGCA ATTTGTTCGG AATGT
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| Protein sequence | MSSTIIQDYM APAAPVSTRQ SSWAEQQTLQ SRSTVSNLIK TLDPATQIPY VPEVALPTPP
ATTTHSIISN DEEHPALAPV VDIPVHQLVQ QTIAASTGVD IDESAFFAAD LSAVYQAVQM
WRASPIGSRV EIFYAVKCNP SPAVLHLLSL MGTSFDCASS SEINQVLSLP SAPSGDRIIF
ANPCKPASFI RTAAQRGVSM MTFDNVDELY KVKRICPNAK LVLRMLTDDS KSLCRLGLKF
GAPVDSCPGL LKVARQLGLN VVGVSFHVGS GCKDPMQFAD AVWRARKVFD MGKEAGYNFD
LLDIGGGFER ETFAEMTQVL KDSFDLYFPE DSGVRIIAEP GRFLVSSAFT LATSIIASRR
APKAEASQQV QAATQEDTKS ADVMYYINDG VYGSFNCIMF DHQIVHPHPL TIGHKLAIAA
PPFPPPPNVQ LEVDLPVQMG YKDVEKVSVW GPTCDSIDCV RQLVDLPKGM DVGDWIGWGE
MGAYTLCAAS TFNGFDRSPV LWTTGGNTED ARMVRAILDS FAATSLR
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