| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC03020 |
|---|
| Symbol | |
|---|
| ID | 3256248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | + |
|---|
| Start bp | 962961 |
|---|
| End bp | 964821 |
|---|
| Gene Length | 1861 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638255524 |
|---|
| Product | mannose-1-phosphate guanylyltransferase, putative |
|---|
| Protein accession | XP_569600 |
|---|
| Protein GI | 58264888 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCACAGCCT TGCCCCACTC GCCCATACAA TGAAGATAAG TGCGCCCCCA CTGCCCGCTC
CAGAAGGCTA ACCCGCTCCG CCCCACACGC TCTGATCCTC GTCGGTGGTT TCGGTACCCG
GCTTAGGCCC TTGACCGTGA GTTCTCCGCC GCTGCTGCCC TTCACCGCTC ACCCCGCCAC
AGCTCTCGTG GCCCAAGCCT CTCGTCGAGT TCTGCAACAA GGTGAGTCCC CCTCTCGTCC
GTGCGCGCCC ACATGCTCAT CCCCTGCGCA GGCCATGATG TGAGTCGCCT AGCCTGCTTC
TCGTGACACG TGTCACGGCG CGTGCAGATG TTCTAGAAGC GGCACGTTTC ATCGCGCGAT
GCGGCCACTG ACAGTCTTCC CACAGCTTGC ACCAAATCGA GGCTCTTGTC AAGGTGCGTG
GCCCAGCTCA TATGCCCAGT CGCACTGCCT GACTCTTGTT ACAGGCGGGT GTCAAGGACA
TCGTCCTCGC TGTCAACTAC CGACCAGAGG TCATGGTCTC TGTACTCAAA AAGACTGAGG
AGGAGTTTGG CATCAACATC CACTTCAGCG TCGAAACCGA ACCTCTCGGC ACTGGTGCGT
GAATAACGAT AACAGTGACG CGCAGACTGA TGTGTACCAA AGCGGGTCCC CTTGCTCTTG
CTCGCGAAAT CTTGGGCAAG GACGACTCTC CGTTCTTTGT TTTGAACTCT GATGTCACCT
GTGTCTATCC CTTTGAGGCT TTCCGGTAAG GCTTGTGCAG TACCTCCATC TCTCGCCACT
CGTCTGACTA TTTGCGCAGA GACTTCCACA TTGCCCACAA GTGCGAAGGT TCCATCATGG
TCACCAAGGT CGCCGAGCCT TCTGCCTATG GTGTCGTGGT CACGAAGCCC AACTCCACTG
TGATTGATCG ATTCGTCGAG AAGCCCGTTG AATTCGTTGG TAACAGGATC AACGCTGGTA
TCTACATATT CAACCCCAGC GTTTTGGACA GGATTGAGGT GAGTCTGTCC CATGGCAAAG
GGTAACATCC AAGCTCACGC CTTTTCCAGC TCCGTCCCAC TTCTATCGAA AAAGAAATCT
TCCCCGCCAT CGCCGCCGAC CAACAACTGC ACTCCTTTGA TCTTCAAGGG TTCTGGATGG
ATGTCGGTCA ACCAAAAGAC TTCCTTGCCG GTACCTGCCT TTACCTTTCC CACCTCACTT
CTCAACATTC TCCCTTGTTG ACTGATCCCT CTCAAAACAA GTGGGTGTAT GGTGGTAATG
TGATGGTTGA CCCTGTGAGT CGTGCTTTAC AAAGTACCGT GGAGGCTCTA ACATTGTTCG
ATAGTCTGCG GAAATCGACC CCACAGCCGT CATCGGCCCC AATGTCGTTA TTGGTCCCGA
CGCGAAGATT GGGCCTGGTG TCCGTCTCCA GCGATGTGTG ATCATGTCCA ACGCTACCGT
GCGAGACCAC TCCTGGATTG CCAACTCCAT TGTCGGGTGG AACAGCACGG TGGGGCGATG
GACAAGAGTG GAGAACATTA CAGTGTTGGG TGACGATGTG ACGATAAAGG ACGAGCTCTA
TGTCAATGGT GCTTCAGTGT TGCCCCACAA GAGTGTAAGT GGGAAAGCTC GTCCAAGCTG
CTGTGTTGGT ACTAAACTAG CGGACGTTGT AGATCTCTAC CTCTATCACT GAGCCCCGTA
TTGTTATGTG TAAGTGTCGC CGATGACGGA GACTGCGCGT TTTGCTGACT TGAGTGTCGC
AGAAAAATAC GGCTTATCGG TGAATAGATA CATCCTGTCA TATTCATTTT TATTAAATTG
ATGGATGTTG TTGGGTTGCC ATTAGGGTTT GGATATATAC ATATTTATTT TGATGCAGCG
A
|
|---|
| Protein sequence | MKALILVGGF GTRLRPLTLS WPKPLVEFCN KAMILHQIEA LVKAGVKDIV LAVNYRPEVM
VSVLKKTEEE FGINIHFSVE TEPLGTAGPL ALAREILGKD DSPFFVLNSD VTCVYPFEAF
RDFHIAHKCE GSIMVTKVAE PSAYGVVVTK PNSTVIDRFV EKPVEFVGNR INAGIYIFNP
SVLDRIELRP TSIEKEIFPA IAADQQLHSF DLQGFWMDVG QPKDFLAGTC LYLSHLTSQH
SPLLTDPSQN KWVYGGNVMV DPSAEIDPTA VIGPNVVIGP DAKIGPGVRL QRCVIMSNAT
VRDHSWIANS IVGWNSTVGR WTRVENITVL GDDVTIKDEL YVNGASVLPH KSISTSITEP
RIVM
|
|---|
| |