Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNC01210 |
Symbol | |
ID | 3256299 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006685 |
Strand | + |
Start bp | 331896 |
End bp | 334355 |
Gene Length | 2460 bp |
Protein Length | 669 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255339 |
Product | conserved hypothetical protein |
Protein accession | XP_569431 |
Protein GI | 58264550 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AAGCCTTCTC ATATTCCAGC AGCACAAACA GAGAGTCACG AGCACCGATT ATCTAGGCAA ATATTTGAGA AAAAATGCCG AAAACTAGTA TGTTGCTGGT CCTCACAATG ACGTTCGCTC CTGACAAGAC ATCAGACAAG GGTGGGAAAG GGCAAAAGAA CAAGGTGTAT GCCTTACCAA CAGCTCAGAG TAAGGACCAC AAGCACGTTT ACTTTCTTAT AGCCGCTAAC ACTACATAGA AAAAAAGGGA CTTGATGTCC CAAAGTTCCA GATGAAAGCA AAGGTGCTTT TTTTTCTCGG GCGATTATGA GATCCCTAGC TAACGTTTCT GCAGGCCGCT AGCCAAGCTC AACTCGCTCC CACCTCCCTA GGAGCTCTTA GCTCCAATGA TCAAGACATC TCGAACTCCT CTTTCGATCT TGGAAATGTT ACTTTCCATG ATGTCATTGA CACTTCGCTC ACGAAGGACT CCTCATCAAA AGCCTTTATG CGAGAGTTGC GCAAAGTCAT CGAACGGAGC GATGTGATTA TTCAAGTTCT TGATGCAAGG GATCCTGAAG GTACGAGGAG TCGTTGGGTG GAGGATGAAG TGCGGAAAAG GGACATGCAG GGGAAGAAGC TGTTGGGTGT GTTAAACAAA ATCGGTGAGT TTTCACTTAT GAGGAGAAGT GAATGCTCAT CCTTGTAATA AGACCTTGTA CCAAGAGCGA ATTTAGAGGC ATGGCTTAAG CACCTTAGGC ATTCTTTTCC CACAATGCCA TTCAAGTCCT CTACTCAAAG CCAAAAGCAG CATTTATCCC AAAATGCCGT TCCTCTTGCC CAACCGTCAA CTGTTCCAGG AAAGCAAGCT GTCCTTCAAG AGCTTCCCAC GACTTCAGCA TCCCTTGGTG CTCCTGCTTT GCTTCATCTC CTCAAACAAT ATGCCCTTTC AACACCACAC AGTTCGCTCA CAGTTGGTGT TGTGGGTTAC CCTAATGTTG GAAAGTCTTC TCTCATCAAC TCCCTGAAGA GAAGTCGGGC CTGTGCAGTG GCTGCTATGC CTGGCAAAAC GAGAGTGGTT CAGGAAGTTG CTCTGGACAA GGGTGTGAAA ATTTTAGATT GTCCTGGTGT AGTATTGGAG GATGTGGGTA GCCATATGGA AGGGGAAGAA GGCAGAAGAA GGCAAGCGGA AATCATGCTG AGAAACTGTG TCAAAGCTGA ATTGGTGCAA GATCCAATCT CTCCAGGTAA GTCTGTCGGA GGGTATTACA AAAATCATTA GCTTATATGA GGTAGTGGAA GTGATTTTGA ACAAAGTGGA ACCTGCTCAA TTACAGAAAC TTTACAACAT CCCTGCATAC GATGACGTTC GCGATTTCTT GATCAAAATG GCACTCATTC GAGGGCGACT CGGCAAAGGT GGTGTCCCCG ACCTTGAAGC TTCCGCCGTT CAAGTACTCC GAGATTGGAA TAGCGGCAAA ATCTCTTATT ACACTACCCC GCCTAAATTT CACCCATCAT CTGCGCCTGC ACCTGCACCT GTCGTAACTC CTGTTCTGGC ACCAAATGAG GCAGCGGGAG ATATGGAAAT GGGCGGCGAC AAGGTTGGAG ATGCCAAGAT TCTTACCACT CTAAGTGAAG CCTTCACAAT CGAGGGGTTA TTTGATAATT TGGGTGACGA TGCTGCCTGG GAAGGAGAGG GTGTGGTCAA AGAAGAGGGA ATTGCCGAAG AGTGAGTTAC CTATCCCAAT AGAAAAATGG AATAAGGCTC ATAAATGCCG ACAGTGCTGA TTTGATTGCT CCTGAACCTG TCATTCCACC TGCCCTTGTA CCTGAACAAA CTGCTCCTCG AGCCTCACTC ACTAAACGTC CATTCATGGG CTCCGAAGAC GAATCTGACG CCGACTCTGA CGCATCAGAT TCTTTCCGAC CCCGCACAAC CCTTGGCCCT TCACCCGCCT CGTTCCAATC CACTTCTTCC AATGCTCTGC ACTTCCCGGC TCAACCGCAA ACTGCTCAGG CTAATAGGCT TTTCACCGCT GAAGAGCTTG CTGTGCTTCC ATCCGGCCTG CTTGATCGCA AGAAGGTCAA GTCTCTAGCC AAGAAGGCTA AAAAGAGACG TGCCGCCGTG GAGCGTACTG AAGGAGAGCT CATGGCTGGA TTCATGGATA TGGAGATGGA CGAACCTGGG GCTCGGGAGG AGACGGAAGT GCAGATGCCC GCATTTGAGC AGAAGTCAAA AAAGGACAAG AGAAAAGAAA AGAAGGAAAC TCAAGCGAAG CAGCGAAAAG AAATGACAAA GGTGGTTGCA GAGATGGAAA TCGATGAAGA TGCCAGGAAG GAGGCAGAAT TTGCCAATTT CTTGGCTAAC ATGAATGGTG AGTGTCTTGT TCCTACCTAA TCAAACCCTA GGCATTAGCT AACCTTTATG CAGCGGATGG ATCAGATGAG GAGTTGTAAA TATGTAGTAT ATAGTAACAC
|
Protein sequence | MPKTNKGGKG QKNKVYALPT AQKKKGLDVP KFQMKAKAAS QAQLAPTSLG ALSSNDQDIS NSSFDLGNVT FHDVIDTSLT KDSSSKAFMR ELRKVIERSD VIIQVLDARD PEGTRSRWVE DEVRKRDMQG KKLLGVLNKI DLVPRANLEA WLKHLRHSFP TMPFKSSTQS QKQHLSQNAV PLAQPSTVPG KQAVLQELPT TSASLGAPAL LHLLKQYALS TPHSSLTVGV VGYPNVGKSS LINSLKRSRA CAVAAMPGKT RVVQEVALDK GVKILDCPGV VLEDVGSHME GEEGRRRQAE IMLRNCVKAE LVQDPISPVE VILNKVEPAQ LQKLYNIPAY DDVRDFLIKM ALIRGRLGKG GVPDLEASAV QVLRDWNSGK ISYYTTPPKF HPSSAPAPAP VVTPVLAPNE AAGDMEMGGD KVGDAKILTT LSEAFTIEGL FDNLGDDAAW EGEGVVKEEG IAEDADLIAP EPVIPPALVP EQTAPRASLT KRPFMGSEDE SDADSDASDS FRPRTTLGPS PASFQSTSSN ALHFPAQPQT AQANRLFTAE ELAVLPSGLL DRKKVKSLAK KAKKRRAAVE RTEGELMAGF MDMEMDEPGA REETEVQMPA FEQKSKKDKR KEKKETQAKQ RKEMTKVVAE MEIDEDARKE AEFANFLANM NADGSDEEL
|
| |