| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC00830 |
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| Symbol | |
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| ID | 3256562 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006685 |
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| Strand | - |
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| Start bp | 234188 |
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| End bp | 236344 |
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| Gene Length | 2157 bp |
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| Protein Length | 558 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638255301 |
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| Product | t-complex protein 1, alpha subunit (tcp-1-alpha), putative |
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| Protein accession | XP_569389 |
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| Protein GI | 58264466 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02340] T-complex protein 1, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCTATAACAA CCAAAAATGG CCTCCACAAT GTACCAGCGC GACCCCAGGG CGGTGAGTCA
TTCTCCATGG GACTCTTTCA TGAAAGCTGA CAATCGTGCT AGGGCCTTTT TTTGGGAGGT
ACCAGAACAA GTGGTGCCGA AGTTAGGGAT GCCAACGGTT AGTCGATTGT CAGACAGTAC
AAGGAAGGAT CAGGGTGTAA TAGAGAGCTG GAACTGATGA GGTGGATAGT GATGGCCTGT
CAAACTGTTT CCAACATCCT CAAGTCATCT TTGGGACCTG TCGGGTACGT TGTGAAATCT
CCTGATTGAT CATCGCGAGT CCTTTCTGAT TTTGCTTCAG TCTTGACAAG ATGCTTGTTG
ACAATGTCGG AGATGTCACT ATCACCAACG ATGGTGCTAC CATTCTCTCG CTCTTGGAAG
TTGCCCACCC TGCTGTTAGT ATCACTGTTT CAATATCCTT GATGCTCGAC TGATAACGTT
TTTAGGCCCG GGTACTTGTT TCTCTTGCAA CTCAGCAAGA TAAAGAAGTC GGTGACGGTA
CCACCTCTGT CGTTCTCCTC GCTTCTGAGC TTTTGAGAAG GGCCAATGAG CTTGTGCGGA
ATAAGATCCA TCCCACCACT GTGATCACCG GTTACAGGTA TGTTGAATTT CGGCTTGTGA
ATGCTAATCA CGCTGAAACT CTGCAACAGA CTTGCGTGCA AGGAGGCGTG CAGATACATG
GCCGAACAGC TTTCAACCAA GGTTGACAAG CTCGGCAAGG ACTCTTTGAT CAACGTTGCC
AAGACTTCTA TGAGCTCTAA GATCCTCGGT GCCGACGATG ACTTTTTCGC ACCTCTTGCT
GTCGACGCTA TGCTTGCCGT CAAGACCATC AACGCCAAGG GTGAAAAGAA GTACCCTGTC
AAGGCTGTCA ACGTTCTCAA GGCCCACGGA AAGTCTGCCA GGGAAAGTTT CATGGTTAAG
GGTTACGCTT TGAACTGTAC TGTCGCTTCT CACGGTACGT CAATGTTCAT ACTCTCACTA
GGGCCCAGCT AACAAAGGAC ACAGCTATGA AGACCCGTAT CACTGGCGCA AAAATTGCCT
GTCTCGACAT GAACCTCGCC AAGCAACGTA TGCACCTTGG TGTTCACATT ACAATTGACG
ACCCCGATCA GCTTGAAGCC ATTCGAGCGC GTGAATCCGA GATCACCCTC GAACGAGTCC
GCAAGATTCT CGCTGCTGGC GCGAACGTTG TTCTCACTAC CAAAGGTATC GACGACCTCG
TGTTAAAGGA GTTTGTTGAG GCTGGTGCGA TGGCTGTTAG GCGATGCAGG AAGGAGGACT
TGAGAAGGAT TGCCAAGGCC ACTGGCGCCA CTCTCATCTC ATCTCTTGCC AATCTTGAAG
GCGATGAGAC CTTTGAAGCT TCAAGCTTGG GTTACGCCGA AGAGGTTGTT CAGGAGAGGA
TTAGCGACGA TGAGTTGATT CTTGTCAAGG GTACAAAGAT CGTCAATTCT AGTTCCGTTA
TCTTGCGAGG TGCCAACGAC TTTATGCTTG ACGAGATGGA GAGGTCTCTG CACGATGCGT
TGTCCATTGT CAAGAGAACG TTGGAGAGTG GAAGTGTGGT TCCGGGTGGT GGTGCTGTTG
AGACTGCCTT GTCCATCTAT CTCGAAAATT TCGCCACTAC TTTGGTGAGT TGTTAGCAAG
TATTTTGTTA CTGATGAGCT GACATTTGCG CAGGGCTCTC GAGAACAACT TGCCATCGCC
GAATTCGCCG CTGCCCTCCT CACCATCCCT AAGACTCTTT CCATCAATGC CGCCAAGGAC
TCTACCGACC TCGTCGCCAA GCTCCGTGCA TACCATAACG CTGCCCAGAA CGCCCCTCTG
AACGATCCCA AGAGAGGGCT CATGTATTAT GGTCTCGACC TTATCAACGG TGAAGTGATT
GACAACAGGC AAGCCGGCGT TTTGGAGCCC ACGATGAGTA AGATTAAGAG TTTGAAGTCC
GCGTTGGAGG CGGCGACGAG TTTGTTGAGG ATAGACGATA GTATACAGGT TGCGCCGGAG
CAGAAGGAGG AGGTTGACCC TCACGGGCAT TAGGTGGAAC GCAGAGACAG AGAGCGTCTG
TAGTGTAGAA TGCAGTTCAC GATCATTAGG GCTATACTAT TTACAATTTC TGCATGA
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| Protein sequence | MASTMYQRDP RAGLFLGGTR TSGAEVRDAN VMACQTVSNI LKSSLGPVGL DKMLVDNVGD
VTITNDGATI LSLLEVAHPA ARVLVSLATQ QDKEVGDGTT SVVLLASELL RRANELVRNK
IHPTTVITGY RLACKEACRY MAEQLSTKVD KLGKDSLINV AKTSMSSKIL GADDDFFAPL
AVDAMLAVKT INAKGEKKYP VKAVNVLKAH GKSARESFMV KGYALNCTVA SHAMKTRITG
AKIACLDMNL AKQRMHLGVH ITIDDPDQLE AIRARESEIT LERVRKILAA GANVVLTTKG
IDDLVLKEFV EAGAMAVRRC RKEDLRRIAK ATGATLISSL ANLEGDETFE ASSLGYAEEV
VQERISDDEL ILVKGTKIVN SSSVILRGAN DFMLDEMERS LHDALSIVKR TLESGSVVPG
GGAVETALSI YLENFATTLG SREQLAIAEF AAALLTIPKT LSINAAKDST DLVAKLRAYH
NAAQNAPLND PKRGLMYYGL DLINGEVIDN RQAGVLEPTM SKIKSLKSAL EAATSLLRID
DSIQVAPEQK EEVDPHGH
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